ACTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCCAGAGGATCCGCG
GAATTCATATGTTTTCACGGAAACTAATATTTGCAACAGGTCAGTGACAG
CATAAAAAAGTAAAGCAGGAAAATGGCTTACAGAGTACTTAGTACACTGA
GAACATGACCACTTACAGTAGCATACAGTCAAGGTGTATGCACAGTGTGT
GTTTTAAGTCAATGCATATGATAGGGAAATAAGATATGCTCAATATGCAG
AGCTAAGACACTTGAGAAGAACCTACTAGGTTAAGGAAAAGAATCAGTGT
GCTTTTCATCTTTACCTTTGTGTAGCCCAAAGAAGCAGAAGCTTTCCTTC
TGAGTCTTTCAGAAGAAATTCAAAGACGACTTGAAGCTGCTGGCATGAAG
GGCAAACGCCTGACTCTGAAAATCATGGTGCGGAAGCCAGGGGCCCCTAT
AGAAACTGCAAAATTTGGAGGCCATGGAATTTGTGATAACATCGCCAGGT
AAACTTATTCTTTAAGAAAGGAATGTTGGTAGTTATATTCTGTGCAGCTT
ATTATAAGTCATACAACATAATATCAGTAGTAGTAGTTTCAGTTCCAACT
TACCAATCCTGGTGTTGTTAAGCAGCCTGTAGAGGCAGCCACAGCCCATG
GTCACTTGACTTAGGTTTAATACCTATTGCAAAATACTGAATGTCAATGG
ATAATTTTTAAAGAAAAGATTTATTTAGTTCACAGTTCCTGGTGATGTAA
GAGGCTGG

CGATGACAGGGGAGGCGGGNGGNCGCCCGGTTGNTCATTTGCCGNGAANN
ANNGNAGTTTACGNTCACCGCCAGGAAGAGAGACANNTGTTGATTTCAGA
GAACTCGGTTGTTTTCACGGGAAATTCTGTGTTCTATATTTTCAGGAATG
TTCACTCCTCGTTATAGATATATACCTTGTCCCTTTAGAAAGAGAAATTA
ATTAAAGAACCACTTACGAGCTGGTGTTGTAGTTTAGGGGTATTTTTTTG
TTTACGTGCATAGCCATTGTAAAAAAGCAAAACAACAACAAAACTCCAGC
AAACCTTTCGTTTTTTTTTTGAGGAAAAANGGGCNCGGCAGCCNNCAGGA
NNGCTGTGTATACACACACACNAACAGAGGAGAAAGAGGCCAAACACCGC
AGGGGAGAAAGGGCACCCCCCAGNACATTTTTATGTGTATGGGTGTTTTG
CCTGTCATATCTACACCATGTGCATGCAGCGCCCATGGAGGCCAGAAGAT
AGTCAGATCCCCTGGAACTAGATAGAGTTAAAAAAACATTTGCAAGCTTC
CAGGTGGTCACCGGGAATTCAATGTGGGACCTCTGGAAGAGCAGCCAGGG
GTCTTAACTGCTGGACCATGTCTCCGGCCCCATTTTTTCTTGTTTTTGTT
TCAGTACAGAAGAAAGGTGTACAGGAAAAGGGCAGGATTAATTGCTTCAA
GGCCCAAAAGGCTATGCCCCTTAGAAATAATGCCTACTGGACTGAAAATG
AGTTGCAGCTCAAA

Query= MSMg01no497_p16.b1 MSMg01no497_p16.b1 CHROMAT_FILE:
MSMg01no497_p16.b1 PHD_FILE: MSMg01no497_p16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:23:51 2005
         (682 letters)



>mm_chr1_38115511_38116592
          Length = 1082

 Score = 1284 bits (664), Expect = 0.0
 Identities = 676/680 (99%)
 Strand = Plus / Minus

                                                                       
Query: 3   actaatatttgcaacaggtcagtgacagcataaaaaagtaaagcaggaaaatggcttaca 62
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 882 actaatatttgcaacaggtcagtgacagcataaaaaagtaaagcaggaaaatggcttaca 823

                                                                       
Query: 63  gagtacttagtacactgagaacatgaccacttacagtagcatacagtcaaggtgtatgca 122
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 822 gagtacttagtacactgagaacatgaccacttacagtagcatacagtcaaggtgtatgca 763

                                                                       
Query: 123 cagtgtgtgttttaagtcaatgcatatgatagggaaataagatatgctcaatatgcagag 182
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 762 cagtgtgtgttttaagtcaatgcatatgatagggaaataagatatgctcaatatgcagag 703

                                                                       
Query: 183 ctaagacacttgagaagaacctactaggttaaggaaaagaatcagtgtgcttttcatctt 242
           ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 702 ctaagacacttgagaagaacctattaggttaaggaaaagaatcagtgtgcttttcatctt 643

                                                                       
Query: 243 tacctttgtgtagcccaaagaagcagaagctttccttctgagtctttcagaagaaattca 302
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 642 tacctttgtgtagcccaaagaagcagaagctttccttctgagtctttcagaagaaattca 583

                                                                       
Query: 303 aagacgacttgaagctgctggcatgaagggcaaacgcctgactctgaaaatcatggtgcg 362
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 582 aagacgacttgaagctgctggcatgaagggcaaacgcctgactctgaaaatcatggtgcg 523

                                                                       
Query: 363 gaagccaggggcccctatagaaactgcaaaatttggaggccatggaatttgtgataacat 422
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 522 gaagccaggggcccctatagaaactgcaaaatttggaggccatggaatttgtgataacat 463

                                                                       
Query: 423 cgccaggtaaacttattctttaagaaaggaatgttggtagttatattctgtgcagcttat 482
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 cgccaggtaaacttattctttaagaaaggaatgttggtagttatattctgtgcagcttat 403

                                                                       
Query: 483 tataagtcatacaacataatatcagtagtagtagtttcagttccaacttaccaatcctgg 542
           ||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||
Sbjct: 402 tataagtcatacaacataatatcagtagtagtagtttgagttacaacttaccaatcctgg 343

                                                                       
Query: 543 tgttgttaagcagcctgtagaggcagccacagcccatggtcacttgacttaggtttaata 602
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 342 tgttgttaagcagcctgtagaggcaggcacagcccatggtcacttgacttaggtttaata 283

                                                                       
Query: 603 cctattgcaaaatactgaatgtcaatggataatttttaaagaaaagatttatttagttca 662
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282 cctattgcaaaatactgaatgtcaatggataatttttaaagaaaagatttatttagttca 223

                               
Query: 663 cagttcctggtgatgtaaga 682
           ||||||||||||||||||||
Sbjct: 222 cagttcctggtgatgtaaga 203


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 682
Length of database: 1082
Length adjustment: 10
Effective length of query: 672
Effective length of database: 1072
Effective search space:   720384
Effective search space used:   720384
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)