Query= MSMg01no498_g12.b1 MSMg01no498_g12.b1 CHROMAT_FILE:
MSMg01no498_g12.b1 PHD_FILE: MSMg01no498_g12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:24:25 2005
(637 letters)
>mm_chr1_193331581_193332615
Length = 1035
Score = 847 bits (438), Expect = 0.0
Identities = 451/456 (98%), Gaps = 2/456 (0%)
Strand = Plus / Plus
Query: 4 ggaattcatatatatccacctgcctctgtctcccagtgctggcattaaaggtgtgcatta 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcatatatatccacctgcctctgtctcccagtgctggcattaaaggtgtgcatta 263
Query: 64 gcacaccctgttcagaggcattgtgtgccaccacagtcgcccagatgtagttttttaagg 123
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 264 gcacaccctgttcagaggcattgtgtgccaccacagtcgtccagatgtagttttttaagg 323
Query: 124 gttgacctgcaacttctcagaccacctgctgtctggatgaagtacccactctttgctcac 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 gttgacctgcaacttctcagaccacctgctgtctggatgaagtacccactctttgctcac 383
Query: 184 tggcctttgtggtgacagctggccttctggctatggtttgaccatgtctgcctccatagc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tggcctttgtggtgacagctggccttctggctatggtttgaccatgtctgcctccatagc 443
Query: 244 ttgtgggacttcacaaactgacccatcccatcttctccagtgctcctccagtgctccttc 303
|||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||
Sbjct: 444 ttgtgggacttcacaaactgacccatcccatc--ccccagtgctcctccagtgctccttc 501
Query: 304 aggctccctgagcaccttgctccttctgtccttcacatgcccttcactctacactccacc 363
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 aggctctctgagcaccttgctccttctgtccttcacatgcccttcactctacactccacc 561
Query: 364 ctcatcccaccagtcttctcctgtctgactctgtcatgaaaacatccctgaactgaaccg 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 ctcatcccaccagtcttctcctgtctgactctgtcatgaaaacatccctgaactgaaccg 621
Query: 424 gaaagttaaggaagggttctttggaaagttagttgt 459
||||||||||||||||||||||||||||||||||||
Sbjct: 622 gaaagttaaggaagggttctttggaaagttagttgt 657
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 637
Length of database: 1035
Length adjustment: 10
Effective length of query: 627
Effective length of database: 1025
Effective search space: 642675
Effective search space used: 642675
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no498_g12.g1 MSMg01no498_g12.g1 CHROMAT_FILE:
MSMg01no498_g12.g1 PHD_FILE: MSMg01no498_g12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:24:25 2005
(592 letters)
>mm_chr1_193517018_193518009
Length = 992
Score = 1002 bits (518), Expect = 0.0
Identities = 539/546 (98%)
Strand = Plus / Minus
Query: 1 tattgccggtccctatgctgtgcataatctcttaacagctggagaagactctgtttgcac 60
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 tattgccggtccctatgctatgcataatctcttaacagctggagaagactctgtttgcac 487
Query: 61 catcctatagacaagtaaacagaattaaatgtctttcttgacaccaaacaactaacattt 120
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 486 catcctatagacaagtaaacagaattaaatgtctttcttgacaccaaacaacgaacattt 427
Query: 121 catcaccctgggacctaactcagttcttgattaactagaaatgattctgcctggatgcca 180
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 cgtcaccctgggacctaactcagttcttgattaactagaaatgattctgcctggatgcca 367
Query: 181 tcatgctgggagggtaagtggagagtgacattcctcaatttcaacatactggcttagagc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 tcatgctgggagggtaagtggagagtgacattcctcaatttcaacatactggcttagagc 307
Query: 241 atctggcagcactccagtgcagctcgagggcaaaggaaagctcgaccttacagaatggct 300
| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 306 acctggcagcactccagtgcagctcgagggcaaaggaaagctcaaccttacagaatggct 247
Query: 301 gggaaacttcaatgttgaaataattattaataaatcaccacggcagcttcactacctgtc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 gggaaacttcaatgttgaaataattattaataaatcaccacggcagcttcactacctgtc 187
Query: 361 tcagtggtttatgctgcccaatgaaagacacacatatttgaatatgccttaaacagcaca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 186 tcagtggtttatgctgcccaatgaaagacacacatatttgaatatgccttaaacagcaca 127
Query: 421 gtagctggaccactgcctgacctccactgctgatagaatctacctcccgccgataattcc 480
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 126 gtagctggagcactgcctgacctccactgctgatagaatctacctcccgccgataattcc 67
Query: 481 aagttactacttattaaattccttgttctatcttggctgctctacatccagttgggcagc 540
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 66 aagttactacttattaaattccttgttctatcttggctgctctacacccagttgggcagc 7
Query: 541 cctctg 546
||||||
Sbjct: 6 cctctg 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 592
Length of database: 992
Length adjustment: 10
Effective length of query: 582
Effective length of database: 982
Effective search space: 571524
Effective search space used: 571524
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
