XXXXXXXXXXXXXXXXXXXXXXXXXTTCGAGAATCCGCGGAATTCCAAAC
TCATTTCCAGCGTTGAATGTTCACTGAAGCAACCTGTGAGGCAGAGATGT
GCTGATTTAAACAGTATCTGTGGGAGTCTGGAGCAGGAGGGAGGCAGAGG
AAAGCCCAATCCTTTAACCAAACCTGTCACACATTTTAAACCATTTCAAA
AGAGTACAGAAGAAAAGAAGCAGGATTCCTCCAGCCCAGAGCTTGGCAAA
CCTCCACTTTGTGCTGTGTCAAAGAAAAGAATCTGATTTTTTTTTTTTTC
AAAAGGGAAGAAAAGTTCTTTTGGGGGGAGCTTAGTTACAGGCTGTTAAA
GACAGGGAGAATTTATCATTCAACAAAATTGGAACTATCAAAAAGCAAAA
CAAATAGTATCTAAGTATCTCATAATTTAAATATTGGTATGTATATAATA
AGAACTGCAAGGACGCATGTAGGTCATGCAGAATCAAGCAGAAACCACTT
AGGTTTTCTCAAGTTACATTGCTAACAATTTTGAACTTCTATGTTTACAA
TGTGCATGGAATAAGCATTTATTTTACAATGGGCATTTTTAATTAGTATA
ATTTCTTTTAAACATACTTATTTTTAAAACAATCAAGGAATCAAACCAAT
TTAGTACATCTTTCTTTGCTTATGACACAAGACTTTAAACTACAATGAAA
ATTAATACAACCTATGCCTACTGCCTGG

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXTCACCTGAGGAATACCGAATGGCAGAGAAGCACC
TGAAAAAATGTTCAACATCCTTAATCATCAGGGAAATGCAAATCAAAACA
ACCCTGAGATTCCACCTCACACCAGTCAGAATGGCTAAGATCAAAAATTC
AGGTGACAGCAGATGCTGGCGAGGATGTGGAGAAAGAGGAACACTCCTCC
ATTGTTGGTGGGATTGCAGGCTTGTACAACTACTCTGGAAATCCGTCTGG
CAGTTCCTCAGAAAATTGGACATAGTAGTACCGGAGGATCCAGCAATACC
TCTCCTGGGCATATATCCAGAAGATGCCCCAACTAGTAAGAAGGACACAT
GCTCCACTATGTTCATAGCAGCCTTATTTATAATAGCCAGAAGCTGGAAA
GAACCCAGATGCCCCTCAACAGAGGAATGGATACAGAAAATGTGGTACAT
CTACATAATGGAGTACTACTCAGCTATTAAAAAGAATGAATTTATGAAAT
TCCTAGCCAAATGGATGGACCTGGAGGGCATCATCCTGAGTGAGGTAACA
CATTCACAAAGGAACTCACACAATATGTACTCACTGATAAGTGGATATTA
GCCCAAAACCTAGGATACCCAAGATATAAGATACAATTTCCTAAACACAT
GAAACTCAAGAAAAATGAGACTTGAGTGTGGACACTATGCCCCTN

Query= MSMg01no499_n19.b1 MSMg01no499_n19.b1 CHROMAT_FILE:
MSMg01no499_n19.b1 PHD_FILE: MSMg01no499_n19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:26:21 2005
         (663 letters)



>mm_chr1_139862192_139863251
          Length = 1060

 Score = 1230 bits (636), Expect = 0.0
 Identities = 655/662 (98%), Gaps = 3/662 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   aatgttcactgaagcaacctgtgaggcagagatgtgctgatttaaacagtatctgtggga 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 859 aatgttcactgaagcaacctgtgaggcagagatgtgctgatttaaacagtatctgtggga 800

                                                                       
Query: 61  gtctggagcaggagggaggcagaggaaagcccaatcctttaaccaaacctgtcacacatt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 799 gtctggagcaggagggaggcagaggaaagcccaatcctttaaccaaacctgtcacacatt 740

                                                                       
Query: 121 ttaaaccatttcaaaagagtacagaagaaaagaagcaggattcctccagcccagagcttg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 ttaaaccatttcaaaagagtacagaagaaaagaagcaggattcctccagcccagagcttg 680

                                                                       
Query: 181 gcaaacctccactttgtgctgtgtcaaagaaaagaatctgatttttttttttttcaaaag 240
           |||||||||||||||||||||||||||||||||||||| ||  |||||||||||||||||
Sbjct: 679 gcaaacctccactttgtgctgtgtcaaagaaaagaatcgga--tttttttttttcaaaag 622

                                                                       
Query: 241 ggaagaaaagttcttttggggggagcttagttacaggctgttaaagacagggagaattta 300
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ggaagaaaagtccttttggggggagcttagttacaggctgttaaagacagggagaattta 562

                                                                       
Query: 301 tcattcaacaaaattggaactatcaaaaagcaaaacaaatagtatctaagtatctcataa 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tcattcaacaaaattggaactatcaaaaagcaaaacaaatagtatctaagtatctcataa 502

                                                                       
Query: 361 tttaaatattggtatgtatataataagaactgcaaggacgcatgtaggtcatgcagaatc 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tttaaatattggtatgtatataataagaactgcaaggacgcatgtaggtcatgcagaatc 442

                                                                       
Query: 421 aagcagaaaccacttaggttttctcaagttacattgctaacaattttgaacttctatgtt 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aagcagaaaccacttaggttttctcaagttacattgctaacaattttgaacttctatgtt 382

                                                                       
Query: 481 tacaatgtgcatggaataagcatttattttacaatgggcatttttaattagtataatttc 540
           ||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||
Sbjct: 381 tacaatgtgcatggaataagcatttattttacaataggcatttt-aattagtataatttc 323

                                                                       
Query: 541 ttttaaacatacttatttttaaaacaatcaaggaatcaaaccaatttagtacatctttct 600
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 322 ttttaaacatacttatttttaaaacaatcaaggaatcaaaccaatttagcacatctttct 263

                                                                       
Query: 601 ttgcttatgacacaagactttaaactacaatgaaaattaatacaacctatgcctactgcc 660
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 ttgcttatgacacaagactttaaactacaatgaaaattaatacaacctatgcctactgcc 203

             
Query: 661 tg 662
           ||
Sbjct: 202 tg 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 37
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 663
Length of database: 1060
Length adjustment: 10
Effective length of query: 653
Effective length of database: 1050
Effective search space:   685650
Effective search space used:   685650
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)