Query= MSMg01no500_c09.b1 MSMg01no500_c09.b1 CHROMAT_FILE:
MSMg01no500_c09.b1 PHD_FILE: MSMg01no500_c09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:26:44 2005
(347 letters)
>mm_chr1_34080192_34080937
Length = 746
Score = 582 bits (301), Expect = e-170
Identities = 336/349 (96%), Gaps = 5/349 (1%)
Strand = Plus / Plus
Query: 1 tccactgtagagaaacaatgccctggtgttctcgtcaatattttcataggagttggg--a 58
|||||||||||||||||||||||||||||||| |||||||||||||||| || ||| |
Sbjct: 201 tccactgtagagaaacaatgccctggtgttcttgtcaatattttcatagaag--ggggaa 258
Query: 59 ggttttgcctgtcagtcagtgttgagctgaacatgtcatgctctgttttaaaagaacgct 118
|||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||
Sbjct: 259 ggttttgcctgtcagtcagtattgagctgaacatgtcatgctctgtttt-aaagaacgct 317
Query: 119 gttatgctgtatgggcatatccgaggttttggaaatcagagcagctttttgtcgcggcac 178
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 318 gttatgctgtatgggcatatccgaggttttggaaatcagagcaactttttgtcgcggcac 377
Query: 179 agtggacaggtgaagattgtgaggcttctgttggtctgaagtggtgctcgtagtaaccag 238
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 agcggacaggtgaagattgtgaggcttctgttggtctgaagtggtgctcgtagtaaccag 437
Query: 239 agacctctgccactttctggtgcagcctaggcctgacagccccttggtgcaggtgcccag 298
|||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 agacctgtgccactctctggtgcagcctaggcctgacagccccttggtgcaggtgcccag 497
Query: 299 gctgcatagccgctgatggaggggttggctggacactataattctggat 347
|||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 498 gctgcatagccgctgatggaggggttggctggacactagaattctggat 546
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 347
Length of database: 746
Length adjustment: 9
Effective length of query: 338
Effective length of database: 737
Effective search space: 249106
Effective search space used: 249106
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no500_c09.g1 MSMg01no500_c09.g1 CHROMAT_FILE:
MSMg01no500_c09.g1 PHD_FILE: MSMg01no500_c09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:26:44 2005
(236 letters)
>mm_chr1_34263424_34264059
Length = 636
Score = 456 bits (236), Expect = e-133
Identities = 236/236 (100%)
Strand = Plus / Minus
Query: 1 taagcaaagctgaaagacggggagaaaggagacacggatttgcgtgagaggtgactcaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 taagcaaagctgaaagacggggagaaaggagacacggatttgcgtgagaggtgactcaca 377
Query: 61 ctgataatacaaccaagggtaacgagatctggagagaggttcctacagatctctggatga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 ctgataatacaaccaagggtaacgagatctggagagaggttcctacagatctctggatga 317
Query: 121 acagatgcaggtctacacagggagcgaggtaagaagaggattggagcctgcggtccctaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 acagatgcaggtctacacagggagcgaggtaagaagaggattggagcctgcggtccctaa 257
Query: 181 caccccagatggctctctgcccgtgtaggttgtccagctgcaggggatccacaatg 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 caccccagatggctctctgcccgtgtaggttgtccagctgcaggggatccacaatg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 236
Length of database: 636
Length adjustment: 9
Effective length of query: 227
Effective length of database: 627
Effective search space: 142329
Effective search space used: 142329
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
