Query= MSMg01no500_d23.b1 MSMg01no500_d23.b1 CHROMAT_FILE:
MSMg01no500_d23.b1 PHD_FILE: MSMg01no500_d23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:26:51 2005
(655 letters)
>mm_chr1_51576789_51577843
Length = 1055
Score = 1154 bits (597), Expect = 0.0
Identities = 630/641 (98%)
Strand = Plus / Minus
Query: 15 gaattccagatgtctctccactgtagaaactatctgcatctggcaaaaccacacccctgc 74
|||||||||||||| | | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 1055 gaattccagatgtcacacaactgtagaaactatctgcatctggcaaaaccacacccctgc 996
Query: 75 catatcaacaggcaaatcatggtcaggcgccatagacagtctgaagcagccccgtatccc 134
||||||| |||||||||||||||||||| |||||||||||||||||||||||| ||||||
Sbjct: 995 catatcaccaggcaaatcatggtcaggcaccatagacagtctgaagcagccccatatccc 936
Query: 135 atacctgcgagtaaaacaaaaacattctcataatatttctgtgttttttaaaggaaccaa 194
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 935 atacctgcgagtaaaacaaaaacattcccataatatttctgtgttttttaaaggaaccaa 876
Query: 195 atttcaagattgccactacaaccagggatggtttcttttgatctttctcatccttcgtga 254
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 875 atttcaagattgccactacaaccagggatggtttctttcgatctttctcatccttcgtga 816
Query: 255 ctatcctaagcaaatgtccccacatctgctttgtgtaagtcttggatttattgtagatca 314
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 815 ctatcctaagcaaatgtccccacatctgctttgtgtaagtcttggatttattgtagatca 756
Query: 315 cagttctttttgatagatacttgtgttcccttttttctgtaacttcccacaggcctttgc 374
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 755 cagttctttttgatagatacttgtgttcccttttttctgtaacttcccacaggcctttgc 696
Query: 375 accctcctatcacttgtggcagctgtcctgcctctgttactccccacatccctctgcaat 434
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 695 accctcctatcacttgtggcagctgtcctgcctctgttactccccacatccctctgcaat 636
Query: 435 aattctgagttcagaatcttgtgctctgtatgggcactaagctttggttatgtgtttgtt 494
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 635 aattctgagttcagaatcttgtgctctgtatgggcactaagctttggttatgtgtttgtt 576
Query: 495 aacttgcgtgctaaagaataaatgaaatcatttgacgagcatcaggaaactttattaggc 554
|||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||
Sbjct: 575 aacttgcgtgctaaagaataaatgaaatcacttgacgagcatcaggaaactttgttaggc 516
Query: 555 aagagaggaagtgctgaaaaactggttttgttttcagttttgctgttgttattgttgttg 614
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 aagagaggaagtgctgaaaaactggttttgttttcagttttgctgttgttattgttgttg 456
Query: 615 tttgggaacatgtaccatggtcggaggataactttctgaag 655
||||||| |||||||||||||||||||||||||||||||||
Sbjct: 455 tttgggagcatgtaccatggtcggaggataactttctgaag 415
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 655
Length of database: 1055
Length adjustment: 10
Effective length of query: 645
Effective length of database: 1045
Effective search space: 674025
Effective search space used: 674025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no500_d23.g1 MSMg01no500_d23.g1 CHROMAT_FILE:
MSMg01no500_d23.g1 PHD_FILE: MSMg01no500_d23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:26:51 2005
(181 letters)
>mm_chr1_51425132_51425712
Length = 581
Score = 327 bits (169), Expect = 3e-94
Identities = 175/177 (98%), Gaps = 1/177 (0%)
Strand = Plus / Plus
Query: 1 caagaaatgtttgaccatactaaggagcttaacaatgtggcagctgatgtgtgtgtggcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caagaaatgtttgaccatactaaggagcttaacaatgtggcagctgatgtgtgtgtggcc 260
Query: 61 tctttgcctagaaatagtgctttgtaaggcacaagaagacttaatttcccactccctaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tctttgcctagaaatagtgctttgtaaggcacaagaagacttaatttcccactccctaca 320
Query: 121 acccgtgtgtgtgtgtgtgtgtggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt 177
||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 321 acctgtgtgtgtgtgtgtgtgtg-tgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt 376
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 50
Number of extensions: 19
Number of successful extensions: 19
Number of sequences better than 10.0: 1
Number of HSP's gapped: 15
Number of HSP's successfully gapped: 1
Length of query: 181
Length of database: 581
Length adjustment: 8
Effective length of query: 173
Effective length of database: 573
Effective search space: 99129
Effective search space used: 99129
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
