GACTCACTATATCGAGAGGATCCGCGGAATTCTGTGGTTTTCTGTATCAT
TTTCTGGATTCTTCTTAACATGGCTGGTCTTGAGATAAAGGGGAAACTCT
AAAGCCTTATGCATTTTCAACTCACTCTATGTCTCTCTTCAAAGCTGTTT
CTTTGGGTGCTTGATGACAAACTTTCCTAGTTCCCAGGCAGAGGGAATGT
TGCTCCATGTTTTGTATTATTCCTGATCATTCTTGTGAATGATGCAGGGG
GGAAGTGAGAAATCTGGGCCCATGTCATCATTACTCAGAAACTGGTATTT
ACCTTTAATAGAAGATTAAAATTAACCTTTAGGGTCATTTTCACTCTAGA
GATTTTTTTTTTGTAAGCAAATTTTGCGCAAACACTATTTCCATAGGCAT
GAAGTTTCTCAGATCAAGTAAATGCTGTCAAAATAATGCCACCAGGAACT
GTTCACTGTCATGAAGAACTAACATTTTGCCTCCAGTTAACACATGAGTC
ATTCAACTGTATCTAAACAGTAAATAAATATTAACTTGTATGACCTAACC
TTTCTGATTGATGGCCTGACTAAATTAAAAGGAAATCTTGGGAAGTTATT
GCTGTTTGTAGAAAATTTTGTTGTAGCATATGATGTTACTAAAGCCCCCA
TTTTCATGCTAGAAAAGCATTTCGGTATATCT

CTATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXCTAAAATTATAGTAATTATTAAACTCT
TTTCTGATAGTCAAAACTGCAATGAGAACTCTGTCAGTCTTCAAGTGTTA
AGAATTAATTACTTCTGAGATAGCAAGCAGGCACCTACTCCTCAGAGCAC
ATTCCAATAGGTTGTAAAACCATTCATCAAAGGGTCATAAAAAGGGGACT
AATGATTTACTCTAGGTGCAAGAACAGAAGACAAAATATTGATTGGATTT
ATCTGTACAAAACTTCACTAATATTCTTGTCATAAAAACTATGTTTTCTA
ACTCTGCAGGACCCTGTAGAGCTGGTCACAGGTGATGAATGTTTAGCCAA
ATAATTACTCATAATGGATATATATGCATGTAAACATTCTCTGCATTCAA
CTTTTTATTTGATTTATGATTTGAATTTATGTGAAAACTTGTGAACTTTT
TTCCATGTGATCATGTATTCTGAAAGATGTATAAGTGCTGAGGACAAAGA
GAAGAGACAGAACTGAGGAGGACTTTTTAGACAGAACTGAGCTCAAAAAG
AACTTAGAAAATAAGGCCCTGAGACTAAAAGGAGTGTTGCATCAGAGCAG
GAGGAGAGAGCAAGATAAGGAGAATGCAGAGTGAAATAACTTAGAAACTA
TAAAGCAACTTAAAAAAATTAAGAGAGAAATG

Query= MSMg01no501_c16.b1 MSMg01no501_c16.b1 CHROMAT_FILE:
MSMg01no501_c16.b1 PHD_FILE: MSMg01no501_c16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:27:57 2005
         (643 letters)



>mm_chr1_70324941_70325987
          Length = 1047

 Score = 1160 bits (600), Expect = 0.0
 Identities = 630/642 (98%), Gaps = 4/642 (0%)
 Strand = Plus / Plus

                                                                       
Query: 6   gaattctgtggttttctgtatcattttctggattcttcttaacatggctggtcttgagat 65
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 gaattctgtggtgttctgtatcattttctggattcttcttaacatggctggtcttgagat 265

                                                                       
Query: 66  aaaggggaaactctaaagccttatgcattttca----actcactctatgtctctcttcaa 121
           ||||  |||||||||||||||||||||||||||    |||||||||||||||||||||||
Sbjct: 266 aaagtagaaactctaaagccttatgcattttcagcccactcactctatgtctctcttcaa 325

                                                                       
Query: 122 agctgtttctttgggtgcttgatgacaaactttcctagttcccaggcagagggaatgttg 181
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 agctgtttctttgggtgcttgatgacaaactttcctagttcccaggcagagggaatgttg 385

                                                                       
Query: 182 ctccatgttttgtattattcctgatcattcttgtgaatgatgcaggggggaagtgagaaa 241
           ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 386 ctccatgttttgtattattcctggtcattcttgtgaatgatgcaggggggaagtgagaaa 445

                                                                       
Query: 242 tctgggcccatgtcatcattactcagaaactggtatttacctttaatagaagattaaaat 301
           |||||||  |||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 446 tctgggctgatgtcatcattactcagaaactggtatttatctttaatagaagattaaaat 505

                                                                       
Query: 302 taacctttagggtcattttcactctagagattttttttttgtaagcaaattttgcgcaaa 361
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 taacctttagggtcattttcactctagagattttttttttgtaagcaaattttgcgcaaa 565

                                                                       
Query: 362 cactatttccataggcatgaagtttctcagatcaagtaaatgctgtcaaaataatgccac 421
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 cactatttccataggcatgaagtttctcagatcaagtaaatgctgtcaaaataatgccac 625

                                                                       
Query: 422 caggaactgttcactgtcatgaagaactaacattttgcctccagttaacacatgagtcat 481
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 caggaactgttcactgtcatgaagaactaacattttgcctccagttaacacatgagtcat 685

                                                                       
Query: 482 tcaactgtatctaaacagtaaataaatattaacttgtatgacctaacctttctgattgat 541
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 686 tcaactgtatctaaacagtaaataaatactaacttgtatgacctaacctttctgattgat 745

                                                                       
Query: 542 ggcctgactaaattaaaaggaaatcttgggaagttattgctgtttgtagaaaattttgtt 601
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 746 ggcctgactaaattaaaaggaaatcttgggaagttattgctgtttgtagaaaattttgtt 805

                                                     
Query: 602 gtagcatatgatgttactaaagcccccattttcatgctagaa 643
           ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 806 gtagcatatgatgttactaaagcccccattttcatgctagaa 847


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 643
Length of database: 1047
Length adjustment: 10
Effective length of query: 633
Effective length of database: 1037
Effective search space:   656421
Effective search space used:   656421
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)