Query= MSMg01no502_h18.b1 MSMg01no502_h18.b1 CHROMAT_FILE:
MSMg01no502_h18.b1 PHD_FILE: MSMg01no502_h18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:29:32 2005
(520 letters)
>mm_chr1_133504720_133505639
Length = 920
Score = 971 bits (502), Expect = 0.0
Identities = 514/518 (99%), Gaps = 1/518 (0%)
Strand = Plus / Plus
Query: 4 ggaattcttcatattacagagaaaggc-cacacatccatgagaccctgggaaaggaaatt 62
||||||||||||| | |||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 203 ggaattcttcatagcaaagagaaaggcacacacatccatgagaccctgggaaaggaaatt 262
Query: 63 aacttctttatggtttattatcagcaaatgttccatttgtctaccgatatagacacccta 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 aacttctttatggtttattatcagcaaatgttccatttgtctaccgatatagacacccta 322
Query: 123 ggaaacattcattttcttaggtgaagatgggtcatatagagagaaagtttagaaggcctg 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 ggaaacattcattttcttaggtgaagatgggtcatatagagagaaagtttagaaggcctg 382
Query: 183 ctttaagtttgaggctggactgggttacagagggaggctaggtcaaaggaagaggaggga 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 ctttaagtttgaggctggactgggttacagagggaggctaggtcaaaggaagaggaggga 442
Query: 243 gagaaatctcgaattagaggattcatggtccagattcatagtccagaaatcattttcttc 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 gagaaatctcgaattagaggattcatggtccagattcatagtccagaaatcattttcttc 502
Query: 303 tatttggaccaatcttacacagggagagtttacttgaacctgaacttgaagcaaaccatt 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 tatttggaccaatcttacacagggagagtttacttgaacctgaacttgaagcaaaccatt 562
Query: 363 cctaaagttaaaaatcaaccaaaactaaggtagtgagacctggactcaggagttacaggt 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 cctaaagttaaaaatcaaccaaaactaaggtagtgagacctggactcaggagttacaggt 622
Query: 423 aaggtctgagctatgcctatctaggtatagaatcccaagtaaatctctttccccttctgg 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 aaggtctgagctatgcctatctaggtatagaatcccaagtaaatctctttccccttctgg 682
Query: 483 gaaatgtcttcatctcctcagtggagattcagcctctg 520
||||||||||||||||||||||||||||||||||||||
Sbjct: 683 gaaatgtcttcatctcctcagtggagattcagcctctg 720
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 520
Length of database: 920
Length adjustment: 10
Effective length of query: 510
Effective length of database: 910
Effective search space: 464100
Effective search space used: 464100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no502_h18.g1 MSMg01no502_h18.g1 CHROMAT_FILE:
MSMg01no502_h18.g1 PHD_FILE: MSMg01no502_h18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:29:32 2005
(554 letters)
>mm_chr1_133529759_133530712
Length = 954
Score = 774 bits (400), Expect = 0.0
Identities = 418/426 (98%), Gaps = 4/426 (0%)
Strand = Plus / Minus
Query: 133 gtctgccttcctagaccttctcctctgactccaggcaggctcccagcttatgagaggaga 192
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 954 gtctgccttcctagaccttctcctctgactccaggcaggctcccagcttatgagaggaga 895
Query: 193 gcatccccttcactgggagaaattcctccctgcttagtcttctctggaaatgctctcaca 252
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 894 gcatccccttcactgggagaaattcctccctgcttagtcttctctggaaatgctctcaca 835
Query: 253 gacatactctgaggtattcttgaccaggtctctaggtgcttccaagctaatcaagttga- 311
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 834 gacatactctgaggtactcttgaccaggtctctaggtgcttccaagctaatcaagttgac 775
Query: 312 ---caagattaattatcacagggaccaaacattcccattggtatttcagggaccagcagc 368
|||||||| | ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 774 aatcaagattagtcatcacagggaccaaacattcccattggtatttcagggaccagcagc 715
Query: 369 tagccaggaagaattctggagccccgaccctcaatgtcagcaagtagtggtgaacagttt 428
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 714 tagccaggaagaattctggagccccgaccctcaatgtcagcaagtagtggtgaacagttt 655
Query: 429 gggccagcaaatgacttaggctcctccatttcagggccttatttcccctctggacttgac 488
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 654 gggccagcaaatgacttaggctcctccatttcagggccttatttcccctctggacttgac 595
Query: 489 cctccctccctgtggcagagcctgtgtgtatgctgttacaacgccaggcaagcaccctct 548
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 594 cctccctccctgtggcagagcctgtgtgtatgctgttacaacgccaggcaagcaccctgt 535
Query: 549 tggagt 554
||||||
Sbjct: 534 tggagt 529
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 554
Length of database: 954
Length adjustment: 10
Effective length of query: 544
Effective length of database: 944
Effective search space: 513536
Effective search space used: 513536
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
