Query= MSMg01no503_b23.b1 MSMg01no503_b23.b1 CHROMAT_FILE:
MSMg01no503_b23.b1 PHD_FILE: MSMg01no503_b23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:30:19 2005
(562 letters)
>mm_chr1_177184798_177185759
Length = 962
Score = 1081 bits (559), Expect = 0.0
Identities = 559/559 (100%)
Strand = Plus / Plus
Query: 4 ggaattcttttgtcttgttgccaaaaactttggcacagatggtgcttaaagctagggcag 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcttttgtcttgttgccaaaaactttggcacagatggtgcttaaagctagggcag 263
Query: 64 agtttcactctcttccacggctctgcactctgtactcttctgcatcagctttgctttcag 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 agtttcactctcttccacggctctgcactctgtactcttctgcatcagctttgctttcag 323
Query: 124 acagatttcatcttcgtgtttacacacaccagatgaccaaaccacaaagaaaaatccttc 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 acagatttcatcttcgtgtttacacacaccagatgaccaaaccacaaagaaaaatccttc 383
Query: 184 tgttcatcatatagataaaataagaggcacgaggacctgatgtactaagcatggtctctc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tgttcatcatatagataaaataagaggcacgaggacctgatgtactaagcatggtctctc 443
Query: 244 tctctctccccatccttcatccagaggactagtgtatctcacagaaatgcacagaatgaa 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tctctctccccatccttcatccagaggactagtgtatctcacagaaatgcacagaatgaa 503
Query: 304 gctggagtgagattattaccaaagaaactcccccaaaaccatgtcatgtaagtaggaggg 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 gctggagtgagattattaccaaagaaactcccccaaaaccatgtcatgtaagtaggaggg 563
Query: 364 cttgtaatccagcaaaccccacagataaaatccatttaagataatacagcctttatcgtc 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 cttgtaatccagcaaaccccacagataaaatccatttaagataatacagcctttatcgtc 623
Query: 424 agcttcagacaaaataaaaattctttaagttctgagacaagccaaattgcttagcacttg 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 agcttcagacaaaataaaaattctttaagttctgagacaagccaaattgcttagcacttg 683
Query: 484 agagcagctatttttgaattatttactgttctccccaccacaccagtccctggcaaccgt 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 agagcagctatttttgaattatttactgttctccccaccacaccagtccctggcaaccgt 743
Query: 544 tagcatccatctcttgcta 562
|||||||||||||||||||
Sbjct: 744 tagcatccatctcttgcta 762
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 562
Length of database: 962
Length adjustment: 10
Effective length of query: 552
Effective length of database: 952
Effective search space: 525504
Effective search space used: 525504
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no503_b23.g1 MSMg01no503_b23.g1 CHROMAT_FILE:
MSMg01no503_b23.g1 PHD_FILE: MSMg01no503_b23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:30:19 2005
(568 letters)
>mm_chr1_177358267_177359235
Length = 969
Score = 1093 bits (565), Expect = 0.0
Identities = 568/569 (99%), Gaps = 1/569 (0%)
Strand = Plus / Minus
Query: 1 atttgcgtttcttcttc-aaatcctttggtcagagggtctgagagagtatgctcgtggac 59
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 769 atttgcgtttcttcttcaaaatcctttggtcagagggtctgagagagtatgctcgtggac 710
Query: 60 aatgagcatttggacattctattaaacttaaggaagcaacaaatcaaggcaggagatgag 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 709 aatgagcatttggacattctattaaacttaaggaagcaacaaatcaaggcaggagatgag 650
Query: 120 tcatttaacaggcaaagccagcacctcactcttacaacccatttagcaaaatcaaacagg 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 649 tcatttaacaggcaaagccagcacctcactcttacaacccatttagcaaaatcaaacagg 590
Query: 180 gaattgagaaccagaaaaagaaattgatcacaaccaagtcattttgttccatgcttcaag 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 589 gaattgagaaccagaaaaagaaattgatcacaaccaagtcattttgttccatgcttcaag 530
Query: 240 ggctgtgtctttttcctcttctgctagacagccatcttgtctgtgagtgactagatatag 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 529 ggctgtgtctttttcctcttctgctagacagccatcttgtctgtgagtgactagatatag 470
Query: 300 ccacagccaacacccaggctttttatcaagagctaagtgtgtccggggcaagggttgccc 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 ccacagccaacacccaggctttttatcaagagctaagtgtgtccggggcaagggttgccc 410
Query: 360 catgttaattctgctgaggtgaagccactcacagtctgtgttgttcattgctctttgtta 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 catgttaattctgctgaggtgaagccactcacagtctgtgttgttcattgctctttgtta 350
Query: 420 gaggaaaagacaaatcagttcccaaaggtctcctgtgctgtgattcattctgagctgatg 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 gaggaaaagacaaatcagttcccaaaggtctcctgtgctgtgattcattctgagctgatg 290
Query: 480 tttaagtctgactcagacttcaatcatttccaggttctttaggactgagctcatataatc 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 tttaagtctgactcagacttcaatcatttccaggttctttaggactgagctcatataatc 230
Query: 540 tccatatccctatccccatcaactcaaga 568
|||||||||||||||||||||||||||||
Sbjct: 229 tccatatccctatccccatcaactcaaga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 568
Length of database: 969
Length adjustment: 10
Effective length of query: 558
Effective length of database: 959
Effective search space: 535122
Effective search space used: 535122
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
