CCCTTCTTTTTCTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXCGCGGAATTCTCTGTTTATCTCTGTACTCCATTTTTAAATTGGG
TTATTTGGGTTTTTTGGAGTGTAACTTCTTTATTTCTTTATATATTTTGG
ATATTATTACTCTGACAGATGTAGGGTTAGTGAAGATCTTTTCCCAATCT
GCTGGTTGCCATTTTGTCCTATTGACAATGACCTTTGCCTTACAGAAGCT
TTACAATTTCATGACATCCCATTTGTCAATTGTTGATCTTAGAGCCTGAG
CCATGGTGTTCTGTTCAGGAATTGTCCTCTGTGCCAGTGAGTTCAAGGCT
ATTTCCCACTTTCTGTCCTATTAGATTCCGTTTATCTGGTTTTATGTAGA
GGTCCATGATCTACTTGGTCTTGAGCTTTGAATAAGGTGATAAATGTGGA
TCAATTTGCATTGTTCTACATGCAGACTGCTAGTTAGACAAGCACCATTT
TTTGAAAATGCTTTCTTTTTTTTCTACTATATGGTTTTGGCCACTCTATC
AATGATCAAGTGACCATATACGTGTGGGGTTATTTCTGGGTCTTTGATTC
TATGCACTATGTTCATAGCAGCCTTATTCATAACAGTCAGAAACTCAAAG
AGCCCAGATATTCCTCAACAGAAGAATGGATAAGGAAGTATGTTACATAC
AATGGAATACTATTCAGCTATTAAAAACAAAGACA

TTTATTTTTCGATGCTAGTGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATATTTTTCCCTTTATTG
GTTTTTAACGTATTTTACGTTAAACATATGAAGTTCCTAGATTAATATAA
TAATTGGGCTTGTTCCTCTCCTAACATTGTATGATTATTTAAAACATGGG
CCTTGGGATGTAGTTTAAAGGTAGATCATGTACTTGTGTTTGCATCAGGT
TCTGATATTAGATCCTGCTAAAAAAAATCAAGATGAAAACAGTTTTGAAG
TTCAGTGGTTTCTTTTGTAATATTCTGTGTAAATGCCTGTTTCAGATTAC
TATATATCCAAGATTTCATTTACTTTTATCTTATGTGTATGTGTTTTTGC
CCATGTGTGTGCCTGGATCTGGAGTTGTAAGCTGTCATGTGGTTTGAACT
AAATTTCCTGGAAGAGCATCCAGTATGTGTCGCTTTTGAGTCAGCCCTGT
TTCAGATTGTTTATCAAGTGGTTATAATCCCAAGTTTAATACGTTTTAGA
AGCATTTTTCTGTGTTACATGTTTTCTGTCACTAGGAAGATTATAATTTT
CCTTCTGTATAAAATTCCCTCCTCTGTGTCTGCATACCAGCCTGCTTTCT
CAGCATATTTCAAAAAAGATAATATAAAGCTGGGTGTGGTGGCTCACGCC
TTTAATCCAGCACTTGGGAGGCAAAGGCAG

Query= MSMg01no503_i23.g1 MSMg01no503_i23.g1 CHROMAT_FILE:
MSMg01no503_i23.g1 PHD_FILE: MSMg01no503_i23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:30:52 2005
         (624 letters)



>mm_chr1_6383250_6384273
          Length = 1024

 Score = 1075 bits (556), Expect = 0.0
 Identities = 607/624 (97%)
 Strand = Plus / Plus

                                                                       
Query: 1   atatttttccctttattggtttttaacgtattttacgttaaacatatgaagttcctagat 60
           |||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||
Sbjct: 201 atatttttccctttattggtttttaacgtattttacattaaacgtatgaagttcctagat 260

                                                                       
Query: 61  taatataataattgggcttgttcctctcctaacattgtatgattatttaaaacatgggcc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 taatataataattgggcttgttcctctcctaacattgtatgattatttaaaacatgggcc 320

                                                                       
Query: 121 ttgggatgtagtttaaaggtagatcatgtacttgtgtttgcatcaggttctgatattaga 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttgggatgtagtttaaaggtagatcatgtacttgtgtttgcatcaggttctgatattaga 380

                                                                       
Query: 181 tcctgctaaaaaaaatcaagatgaaaacagttttgaagttcagtggtttcttttgtaata 240
           ||||||||||||||||||||||| ||||||||||||||||  ||||||||||||||||||
Sbjct: 381 tcctgctaaaaaaaatcaagatggaaacagttttgaagtttggtggtttcttttgtaata 440

                                                                       
Query: 241 ttctgtgtaaatgcctgtttcagattactatatatccaagatttcatttacttttatctt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttctgtgtaaatgcctgtttcagattactatatatccaagatttcatttacttttatctt 500

                                                                       
Query: 301 atgtgtatgtgtttttgcccatgtgtgtgcctggatctggagttgtaagctgtcatgtgg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 atgtgtatgtgtttttgcccatgtgtgtgcctggatctggagttgtaagctgtcatgtgg 560

                                                                       
Query: 361 tttgaactaaatttcctggaagagcatccagtatgtgtcgcttttgagtcagccctgttt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tttgaactaaatttcctggaagagcatccagtatgtgtcgcttttgagtcagccctgttt 620

                                                                       
Query: 421 cagattgtttatcaagtggttataatcccaagtttaatacgttttagaagcatttttctg 480
           |||||| ||||| |||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 621 cagattatttattaagtggttataatcgcaagtttaatacgttttagaagcatttttctg 680

                                                                       
Query: 481 tgttacatgttttctgtcactaggaagattataattttccttctgtataaaattccctcc 540
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tgttacatgttttctgtcattaggaagattataattttccttctgtataaaattccctcc 740

                                                                       
Query: 541 tctgtgtctgcataccagcctgctttctcagcatatttcaaaaaagataatataaagctg 600
           |||| |||||||||| ||||||||| ||||||||||||||| ||||||||| ||||| ||
Sbjct: 741 tctgcgtctgcatactagcctgcttcctcagcatatttcaagaaagataatctaaaggtg 800

                                   
Query: 601 ggtgtggtggctcacgcctttaat 624
           ||  ||||||||||||||||||||
Sbjct: 801 ggcatggtggctcacgcctttaat 824


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 624
Length of database: 1024
Length adjustment: 10
Effective length of query: 614
Effective length of database: 1014
Effective search space:   622596
Effective search space used:   622596
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)