ACTTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCG
GAATTCTTACTATGCTTTATGTGTGTCTACAGCAAACCAATAGCCAACAT
CAAAGTAAATGGTGAGAAGCTTGAAGCAATCCCACTAAAATCAGGGACTA
GACAAGGCTGTCCACTCTCGCCCTACCTATTCAACATTGTACTTGAAGTC
CTAGCCAGAGCAATTAGACAACAAAAGGAGATCAAGGGGATACAAATTGG
AAAGGAAGAAGTCAAAATATCACTTTTTGCAGATGATATGATAGTATATA
TAAGTGACCCTAAAAATTCCACCAGAGAACTCCTAAGCCTGATAAACAGA
TTCAATGAAGTAGCTGGATATAAAATTAACTTACACAAGTCAATGGCCTT
TCTGTATACAAAGGATAAACAGGCTGAGAAAGAAATTAGGGAAACAACAC
CCTTCTCAATAGTCACAAATAATATAAAATACCTTGGCGTGACTCTAACT
AAGGAAGTAAAAGATCTGTATGATAAGAACTTCAAGTCTCTAAAGAAAGA
AATTAAAGAAGATCTCAGAAGATGGAAAGATCTCCCATGCTCATGGATTG
GCAAGATCAACATTGTAAAAATATCTATCTTGCCAAAAGCCATCTACAGA
TTCAATGCAATCCCCATCAAAATTCCAACTCAATTCTTCAACGAATTAGA
AAGGGCAATCGGCAGATTCATCTGGAATAACAAAAAACCGAGGATAGCAA
AAACTCTTCTCAAGGATA

NNCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXATTGTCTTAAAGATTGCCTTT
GCTCATATATCTCCATTTTTCATTGGACTTAAATGTAAAAAAAGTAGTAG
AGGATTCAAATGTTTCAGGCAAAGAAAATGGACACGACTAATTTCCATCA
AATCTTTTCTATCTTAAATAACAGTTATTGTAAACTATTCATAAAAGTAC
TGAGAAGTATCCCTTTGAAGTGTGGACAGCATACCCAAAGTTGGTCAAAT
TCTTTAAAATATTTTTTTTGTATGAACAAGAGTATATTTTCTAAAATAGG
AAATAATTCTTCAGAATCTTTTAATAGGCTAAAATATTAGATAACCATTT
TCTGAATATCTCTCTATATGCAGGTCATTCATATTAATATCATGGGGGCA
TAATACAGAATAACCATTGTCAGTAAAACCACCTACATCTCATTCTGGCA
AGGATGTAGAGTAAGGAGAATGCTTATCGTTTGCTTGTAGGAGTGCAAAC
TAGTACAGTTACTATGGAAATCAGTGGTTTCAATTTACTTTAGCTTCCAG
CTATACACTCTTAGGCATACCCACAAATGACTACTATTGAGATACTTGCT
CTACTATGTCCATTGTTGCTCTACTTATAATAGTGAGAAATTAAAAAAAA
ATTAATAAAAAGACTCGATGTCTATCAACAGATGAGTTGATAAAATATGC
AATGGACTATTATTAGACATTATAAAAATTCATTAG

Query= MSMg01no504_h13.g1 MSMg01no504_h13.g1 CHROMAT_FILE:
MSMg01no504_h13.g1 PHD_FILE: MSMg01no504_h13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:32:05 2005
         (603 letters)



>mm_chr1_32047612_32048614
          Length = 1003

 Score = 1067 bits (552), Expect = 0.0
 Identities = 570/576 (98%)
 Strand = Plus / Minus

                                                                       
Query: 1   attgtcttaaagattgcctttgctcatatatctccatttttcattggacttaaatgtaaa 60
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 attgtcttaaagattacctttgctcatatatctccatttttcattggacttaaatgtaaa 517

                                                                       
Query: 61  aaaagtagtagaggattcaaatgtttcaggcaaagaaaatggacacgactaatttccatc 120
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 516 aaaagtagtagaggattcaattgtttcaggcaaagaaaatggacacgactaatttccatc 457

                                                                       
Query: 121 aaatcttttctatcttaaataacagttattgtaaactattcataaaagtactgagaagta 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 aaatcttttctatcttaaataacagttattgtaaactattcataaaagtactgagaagta 397

                                                                       
Query: 181 tccctttgaagtgtggacagcatacccaaagttggtcaaattctttaaaatatttttttt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 tccctttgaagtgtggacagcatacccaaagttggtcaaattctttaaaatatttttttt 337

                                                                       
Query: 241 gtatgaacaagagtatattttctaaaataggaaataattcttcagaatcttttaataggc 300
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 gtatgaaaaagagtatattttctaaaataggaaataattcttcagaatcttttaataggc 277

                                                                       
Query: 301 taaaatattagataaccattttctgaatatctctctatatgcaggtcattcatattaata 360
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 taaaatattagatatccattttctgaatatctctctatatgcaggtcattcatattaata 217

                                                                       
Query: 361 tcatgggggcataatacagaataaccattgtcagtaaaaccacctacatctcattctggc 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 216 tcatgggggcataatacagaataaccattgtcagtaaaaccacctacatctcattctggc 157

                                                                       
Query: 421 aaggatgtagagtaaggagaatgcttatcgtttgcttgtaggagtgcaaactagtacagt 480
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 156 aaggatgtagagtaaggagaacgcttatcgtttgcttgtaggagtgcaaactagtacagt 97

                                                                       
Query: 481 tactatggaaatcagtggtttcaatttactttagcttccagctatacactcttaggcata 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96  tactatggaaatcagtggtttcaatttactttagcttccagctatacactcttaggcata 37

                                               
Query: 541 cccacaaatgactactattgagatacttgctctact 576
           |||||||||||||||||| |||||||||||||||||
Sbjct: 36  cccacaaatgactactatagagatacttgctctact 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 603
Length of database: 1003
Length adjustment: 10
Effective length of query: 593
Effective length of database: 993
Effective search space:   588849
Effective search space used:   588849
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)