NNNAATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
CGCGGAATTCTGTTTACTCCTCTCTGTAGGTGTTGCAGCTGAGGTGACAG
ATTCACACTCGGAGACAGAGGAGGAAGACAGAGTGAAGGATTTGGACAGT
AGCATCTCTGTTAAGGAGGCAGAAGGACAATGAGAAGCTTAGTCTCCATA
ATGGAGACTCTTTTCATTTGCATGAGCCAAGGCCAATGTCTGGAGGGGCG
GGTTATGGGCAACAGAGTCATTTTTCATGGGTCTGGCTGCCAGCGACTCG
AACATTGATCAGCCAAGTTTATAGCTCCATGCTCAGACAAGGAGCTCTGG
CTCAGATGTGTGCTGAAAGTGGGGCAGATACAGCCTAGTTCTCCCTAACC
AGCAACAGCCAGCTCAGGTCTCTGGCAGAAAAATTGAGTCAGCTTTGCCA
CTCCCTTCAAGGAGGATGAATCTCTAACAAACATAGGTTATGGACCCACC
CGTCCCAGTGAAGTCCTTTATTTTGAACCAGTCTCAAGATGAATCCTAGC
CTGCTGGAGAAAAATTCCACCAGCATGATTTTAAGGGAACCTCACCAGAG
CATGATTCTAATGGCCTGACATCACGTCATTGGACCAAATTTAGCTTGAG
CAGAACCCTGAAGATCTCCAAGAGATCCATCCTTTGAGGGTTCTAAGAGT
TGAAGAAGGCAGAAATGAAGACTTTAGCAGTAGTGGGGTTTGGGAA

NCCCGCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXTACCAAAAAAAGTCCTCCCAACTAAGCCTCTTG
CTTGCCCATGTTCCAGCCCACCCAGCACATGAATGTCCCAAGCACAGACT
CTGTCCATGAAGGAGCTAAAGAATCAATTCTTAGAGATTCACTATGGCCT
GCTGCTGTGCCTAGCTGACAGCAGACAAGCTGTCTGACCTAATCTTTGCT
TCCAATATTCCTGCACTGTGATTAGAGAAACAAGATAGAGACAGATGGTA
ACCCAGAAAACTAATAGAAAGTTANATGNCTCTTGGTGGGGAAATTCATG
GCTTGTGCAGTTTTGTTTTGACCAGAACTCATAGAATTATCAGCAAAAGA
TAAAACGCTTGCACGTGATATCTGGATGTCATTGCAATCAATGGTATACC
ACAACAGAATTCCGTTTATTCATTCATCCAACAAGTACTTGTCAAACATT
TACTCCAAGGATATTTTACCCTTACAATGATTTTTACAGTTTGCAAAACA
CATCTACAAACCCTGACTATTTGATTCTTATTGAGTAGGCAGTTCAGCCA
TAGATGAATCAGAGGCTCAAATAAAGAGTAGGTGACTTTCCTGCTTTGGG
CTTACCAACAAAGTCCAGGACAGAAGGCTACAACTTCTGTTAGTCACTTC
TATGCCCACCACACTTAGCAGAGGCAATGTGCACAGCTTGGAGTCGTTG

Query= MSMg01no505_a10.b1 MSMg01no505_a10.b1 CHROMAT_FILE:
MSMg01no505_a10.b1 PHD_FILE: MSMg01no505_a10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:32:50 2005
         (644 letters)



>mm_chr1_161479794_161480837
          Length = 1044

 Score = 1203 bits (622), Expect = 0.0
 Identities = 637/642 (99%)
 Strand = Plus / Plus

                                                                       
Query: 3   tctgtaggtgttgcagctgaggtgacagattcacactcggagacagaggaggaagacaga 62
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 tctgtaggtgtggcagctgaggtgacagattcacactcggagacagaggaggaagacaga 262

                                                                       
Query: 63  gtgaaggatttggacagtagcatctctgttaaggaggcagaaggacaatgagaagcttag 122
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 gtgaaggatttggacagtagcatctctgttaaggaggcagaaggacaatgagaagcttag 322

                                                                       
Query: 123 tctccataatggagactcttttcatttgcatgagccaaggccaatgtctggaggggcggg 182
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 tctccataatggagactcttttcatttgcatgagccaaggccaatgtctggaggggcggg 382

                                                                       
Query: 183 ttatgggcaacagagtcatttttcatgggtctggctgccagcgactcgaacattgatcag 242
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 383 ttatgggcaacagagtcatttttcatgggtctggctgccagcgacttgaacattgatcag 442

                                                                       
Query: 243 ccaagtttatagctccatgctcagacaaggagctctggctcagatgtgtgctgaaagtgg 302
           ||||||  |||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 ccaagtcaatagctccgtgctcagacaaggagctctggctcagatgtgtgctgaaagtgg 502

                                                                       
Query: 303 ggcagatacagcctagttctccctaaccagcaacagccagctcaggtctctggcagaaaa 362
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 ggcagatacagcctagttctccctaaccagcaacagccagctcaggtctctggcagaaaa 562

                                                                       
Query: 363 attgagtcagctttgccactcccttcaaggaggatgaatctctaacaaacataggttatg 422
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 attgagtcagctttgccactcccttcaaggaggatgaatctctaacaaacataggttatg 622

                                                                       
Query: 423 gacccacccgtcccagtgaagtcctttattttgaaccagtctcaagatgaatcctagcct 482
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 gacccacccgtcccagtgaagtcctttattttgaaccagtctcaagatgaatcctagcct 682

                                                                       
Query: 483 gctggagaaaaattccaccagcatgattttaagggaacctcaccagagcatgattctaat 542
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 gctggagaaaaattccaccagcatgattttaagggaacctcaccagagcatgattctaat 742

                                                                       
Query: 543 ggcctgacatcacgtcattggaccaaatttagcttgagcagaaccctgaagatctccaag 602
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 ggcctgacatcacgtcattggaccaaatttagcttgagcagaaccctgaagatctccaag 802

                                                     
Query: 603 agatccatcctttgagggttctaagagttgaagaaggcagaa 644
           ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 803 agatccatcctttgagggttctaagagttgaagaaggcagaa 844


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 644
Length of database: 1044
Length adjustment: 10
Effective length of query: 634
Effective length of database: 1034
Effective search space:   655556
Effective search space used:   655556
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no505_a10.g1 MSMg01no505_a10.g1 CHROMAT_FILE:
MSMg01no505_a10.g1 PHD_FILE: MSMg01no505_a10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:32:50 2005
         (343 letters)



>mm_chr1_161619031_161619773
          Length = 743

 Score =  594 bits (307), Expect = e-174
 Identities = 334/343 (97%)
 Strand = Plus / Minus

                                                                       
Query: 1   cttggtggggaaattcatggcttgtgcagttttgttttgaccagaactcatagaattatc 60
           |||||||||||||||| ||||||||||| || | ||||||||||||||||||||||| ||
Sbjct: 543 cttggtggggaaattcgtggcttgtgcaattctattttgaccagaactcatagaattgtc 484

                                                                       
Query: 61  agcaaaagataaaacgcttgcacgtgatatctggatgtcattgcaatcaatggtatacca 120
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 483 agcaaaagataaaacgcttgcgcgtgatatctggatgtcattgcaatcaatggtatacca 424

                                                                       
Query: 121 caacagaattccgtttattcattcatccaacaagtacttgtcaaacatttactccaagga 180
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 423 caacagaattccgtttattcattcatccaacaagtacttatcaaacatttactccaagga 364

                                                                       
Query: 181 tattttacccttacaatgatttttacagtttgcaaaacacatctacaaaccctgactatt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 tattttacccttacaatgatttttacagtttgcaaaacacatctacaaaccctgactatt 304

                                                                       
Query: 241 tgattcttattgagtaggcagttcagccatagatgaatcagaggctcaaataaagagtag 300
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 tgattcttactgagtaggcagttcagccatagatgaatcagaggctcaaataaagagtag 244

                                                      
Query: 301 gtgactttcctgctttgggcttaccaacaaagtccaggacaga 343
            ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 atgactttcctgctttgggcttaccaacaaagtccaggacaga 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 343
Length of database: 743
Length adjustment: 9
Effective length of query: 334
Effective length of database: 734
Effective search space:   245156
Effective search space used:   245156
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)