Query= MSMg01no505_h10.b1 MSMg01no505_h10.b1 CHROMAT_FILE:
MSMg01no505_h10.b1 PHD_FILE: MSMg01no505_h10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:33:23 2005
(707 letters)
>mm_chr1_110205644_110206754
Length = 1111
Score = 1299 bits (672), Expect = 0.0
Identities = 697/706 (98%), Gaps = 4/706 (0%)
Strand = Plus / Plus
Query: 5 gaattcttgttt-acattttctctcagaagtatttttaatgtgatttaaaatttttaatg 63
|||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcttgtttaaaattttctctcagaagtatttttaatgtgatttaaaatttttaatg 264
Query: 64 tgcttagacaactttgaaagtatagtatattttaaattgtatgttttatattgtgcttta 123
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 265 tgcttagacaactttgaaagtatagtatattttaaattgtatgtcttatattgtgcttta 324
Query: 124 aaaagtaactgtgtttcttagctattagcttctgaaattcatggttggcaggtacgatac 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 aaaagtaactgtgtttcttagctattagcttctgaaattcatggttggcaggtacgatac 384
Query: 184 agtttttaaaaattacagttatatatattcccatcaaattcagaacaatgtgttaaatgt 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 agtttttaaaaattacagttatatatattcccatcaaattcagaacaatgtgttaaatgt 444
Query: 244 ttacttataattaaggaatattttttgtcttccttattattctgagttttcaaaagataa 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ttacttataattaaggaatattttttgtcttccttattattctgagttttcaaaagataa 504
Query: 304 cttcattattttagtataaatgacaccagcataaagaggttctgtattacaataattctt 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 cttcattattttagtataaatgacaccagcataaagaggttctgtattacaataattctt 564
Query: 364 cttttacaaataatttatgatatgttagaattaaataaaagtcttacttctttacaattc 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 cttttacaaataatttatgatatgttagaattaaataaaagtcttacttctttacaattc 624
Query: 424 tgaagatcaaataatagacatttgtttgtatttattattgtgttaacattgtttaatttg 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 tgaagatcaaataatagacatttgtttgtatttattattgtgttaacattgtttaatttg 684
Query: 484 caaatatgtttttaaaacacagagacaaaaatacaatagatgggaagggtaagttccaaa 543
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 caaatatgtttttaaaaaacagagacaaaaatacaatagatgggaagggtaagttccaaa 744
Query: 544 ttgatttatataggagatggtttctggttctgtcaagatatctgagcacaggtacttatg 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 ttgatttatataggagatggtttctggttctgtcaagatatctgagcacaggtacttatg 804
Query: 604 cctaatccatctctacactcacacagcacaccagacttataaaaatattcttacgtagag 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 cctaatccatctctacactcacacagcacaccagacttataaaaatattcttacgtagag 864
Query: 664 agatagagatacaggtctttttttctctc--tctcaa-tcttctga 706
|||||||||||||||||||||||| | || |||||| ||||||||
Sbjct: 865 agatagagatacaggtctttttttttttcgctctcaaatcttctga 910
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 37
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 707
Length of database: 1111
Length adjustment: 10
Effective length of query: 697
Effective length of database: 1101
Effective search space: 767397
Effective search space used: 767397
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)
| Query= MSMg01no505_h10.g1 MSMg01no505_h10.g1 CHROMAT_FILE:
MSMg01no505_h10.g1 PHD_FILE: MSMg01no505_h10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:33:23 2005
(681 letters)
>mm_chr1_110287075_110288155
Length = 1081
Score = 561 bits (290), Expect = e-164
Identities = 302/306 (98%)
Strand = Plus / Minus
Query: 1 aagaacaccaacaagagagtctgtagaacaggcaaacggagcaagctacagctacactta 60
||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 306 aagaacaccaacacgagagtctgtagaacaggcaaacggagcaagctacagctacattta 247
Query: 61 ggagagcaagcagtcagagcatacatcattccacagtctgctagtgttcaaagctataaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 ggagagcaagcagtcagagcatacatcattccacagtctgctagtgttcaaagctataaa 187
Query: 121 gcatgcttatgaagggttgaataaaatatgttatatttctctatcctgataaatttactt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 186 gcatgcttatgaagggttgaataaaatatgttatatttctctatcctgataaatttactt 127
Query: 181 cagaagggcaaaatgtgtgaagttattttctatatgactcaaacttggaaaaccatcaaa 240
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 126 cagaagggcaaaatgtgtgaagttattttctatatgactcaagcttggaaaaccatcaaa 67
Query: 241 gatgtatgtctctattttacacatttctcagttctctggatggattggctatgtttagat 300
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66 gatgaatgtctctattttacacatttctcagttctctggatggattggctatgtttagat 7
Query: 301 gaatat 306
||||||
Sbjct: 6 gaatat 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 681
Length of database: 1081
Length adjustment: 10
Effective length of query: 671
Effective length of database: 1071
Effective search space: 718641
Effective search space used: 718641
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
