GACTCACTATATTCAGAGGATCCGCGGAATTCCACCATATCATTCCTTGT
CATACAAGCTCAGCCTGATCGAAGGCCCCGTTTCTTTGTTTCCAGTCATT
AACTAAGAATACAAACCAGAAGCTGGGTTTTAGTGGCACAGGCTGCCATT
CTAACAACTGCGGAAGTGGAAATGGGAGGATCATGAGTTCAAGCCCTGCC
TGAGCATGAGTTCAAGGCCAGCTTGGACGATTCAGTGAGTGGCAGAATGT
TCGCCTGGCATGGCTGAGGGCCTAGGCCCAGCCCCCAGCCCTCCCATCTC
CACAGCCCAGGACGAGAACTTAGAAAGCACTGTGGAGTGATGACGGAGTC
AGTTGCACTGGTTAGGCCTCTTATTCTAAAGGACGTTTACCTTTAATGTC
ACGCTTCTTGGTTTTCCTGGTGAAAGCTCTTGAACTGGGTGAACTCCCAG
ACATGGCAGGATGAATCCATTATACCTACAAACGTAGAAAGTTAAGAAAA
CAACCTTAGGTCCGGAGACCACAGTGTCCCTAAAGAACAAGAAGGAAACG
CCCTGCTTTTAGGGCTGACATGATTTTCCTCCTCCTCCTCCCTCCTTTTT
TTTTTTTTTTTTAAATTTCTTTTAAGACAAAAGTCTTACTATGTAGCCCT
ATTTGGCTTGGAATGAAGTTTGGTCTCAAATTCACAGGGATCCTCCTGCC
TCTCTCTGTCTCCAGAGAGTCCAATTAAAG

AATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXTAAGTCAGCACATCACAAAGACACCAA
TACACCCATGTTTATTGCTGCACTATTCACAATAGCTAAATAAAGAACTA
ACCCAGATGGCAATCAACAGATACATGGTTAAAGAACATGCGTTCTATAT
GTATATATGTATGGGATTTTAAAAATTATTTATTTACATGTATGTGGGTG
AGTATGGGAGCAAGTGCTACAGTGTATCCGTGGAGATCAGAGAGCAGGTT
GGTTCGTTCCTTCCACCAGGTAGGTTGTAGGGAATGAACTCCGGGTCTGA
GGATTATTGAAGTCTTTATCTGCTGAGCCATCTTCTGGCCCCAGCAATTG
AATTTTGCTAGCAAAGAATGAAAATTGCTGTAGGAAAAATGGATGGAACT
GGAAATCATTGTGTTAAGTGACCTAAGCCACACTTGGGGAAAGTATAGCA
TGCTTTCTGTCATATGCAGAATCTAGATTTAAATCTGTTATATGCATGTG
TATGTGTGACATGAAAGCAGAGAGGACACTATGGAGGCTGGAGACATGGC
TCCGCAGTTACAAGAAAGACTTGCTCCTGCAGAGGACTAGAGTCAATTTC
CAGCACATTAGCTCCTTACAGATACTAGGGATCCAACACCCTCTGGCCTC
TGGAGACACTGCACTCCTGCACATACCTACCTATACGGACATAGACACAT
ATAACCTAAACTTCTTAATCAAAAAGGGGAAGGAGG

Query= MSMg01no507_f05.b1 MSMg01no507_f05.b1 CHROMAT_FILE:
MSMg01no507_f05.b1 PHD_FILE: MSMg01no507_f05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:35:50 2005
         (639 letters)



>mm_chr1_192882136_192883174
          Length = 1039

 Score = 1071 bits (554), Expect = 0.0
 Identities = 608/632 (96%), Gaps = 10/632 (1%)
 Strand = Plus / Plus

                                                                       
Query: 8   aattccaccatatcattccttgtcatacaagctcagcctgatcgaaggccccgtttcttt 67
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 208 aattccaccatatcattccttgtcatacaagctcagcctgatcgaaggccccgtttcttt 267

                                                                       
Query: 68  gtttccagtcattaactaagaatacaaaccagaagctgggttttagtggcacaggctgcc 127
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 gtttccggtcattaactaagaatacaaaccagaagctgggttttagtggcacaggctgcc 327

                                                                       
Query: 128 attctaacaactgcggaagtggaaatgggaggatcatgagttcaagccctgcctgagcat 187
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 attctaacaactgcggaagtggaaatgggaggatcatgagttcaagccctgcctgagcat 387

                                                                       
Query: 188 gagttcaaggccagcttggacgattcagtgagtggcagaatgttcgcctggcatggctga 247
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 gagttgaaggccagcttggacgattcagtgagtggcagaatgttcgcctggcatggctga 447

                                                                       
Query: 248 gggcctaggcccagcccccagccctcccatctccacagcccaggacgagaacttagaaag 307
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 gggcctaggcccagcccccagccctcccatctccacagcccaggacgagaacttagaaag 507

                                                                       
Query: 308 cactgtggagtgatgacggagtcagttgcactggttaggcctcttattctaaaggacgtt 367
           ||||||||||||||||| ||| ||||||||||||||||||||||||||||| |||| |||
Sbjct: 508 cactgtggagtgatgacagagccagttgcactggttaggcctcttattctataggatgtt 567

                                                                       
Query: 368 tacctttaatgtcacgcttcttggttttcctggtgaaagctcttgaactgggtgaactcc 427
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 568 tacctttaatgtcacgcttcttggtttttctggtgaaagctcttgaactgggtgaactcc 627

                                                                       
Query: 428 cagacatggcaggatgaatccattatacctacaaacgtagaaagttaagaaaacaacctt 487
           |||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 628 cagacatggcaggacgaatccattatacctacaaatgtagaaagttaagaaaacaacctt 687

                                                                       
Query: 488 aggtccggagaccacagtgtccctaaagaacaagaaggaaacgccctgcttttagggctg 547
           |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||
Sbjct: 688 aggtccggagaccacagtgtccctaaagaacaggaaggaaacgccctgcctttagggctg 747

                                                                       
Query: 548 acatgattttcctcctcctcctccctcctttttttttttttttttaaatttcttttaaga 607
           ||||||||||| ||||||||||||||||||||||           ||||||||||| |||
Sbjct: 748 acatgattttcttcctcctcctccctcctttttta----------aaatttcttttgaga 797

                                           
Query: 608 caaaagtcttactatgtagccctatttggctt 639
           ||||||||||||||||||||||||||||||||
Sbjct: 798 caaaagtcttactatgtagccctatttggctt 829


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 639
Length of database: 1039
Length adjustment: 10
Effective length of query: 629
Effective length of database: 1029
Effective search space:   647241
Effective search space used:   647241
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)