XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTTTGT
TCAGTTCTGAGCCCCATTTTTTAATGGGGTTATTTGATTTTCTGAAGTCC
ACCTTCTTGAGTTCTTTATATATGTTGGATATTAGTCCCAACTGGTAAGA
AGGACACATGCTCCACTATGTTCATAGCAGCCCTATTTATAATAGCCAGA
AGCTGGAAAGAACCCAGATGCCCCTCAACAGAGGAATGGATACAGAAAAT
GTGGTACATCTACACAATGGAGTACTACTCAGCTATTAAAAAGAATGAAT
TTATGAAATTCCTAGCCAAATGGATGGACCTGGAGGGCATCATCCTGAGT
AAGGTAACACATTCACAAAGGAACTCACACAATATGTACTCACTGATAAG
TGGATATTAGCCCAAAACCTAGGATACCCAAGATATAAGATACAATTTCC
TAAACACATGAAACTCAAGAAAAATGAAGACTGAAGTGTGGACACTATGC
CCCTCCTTAGAAGTGGGAACAAAACACCCTTGGAAGGAGTTACAGAGACA
AAGTTTGGAGCTGAGATGAAAGGATGGACCATGTAGAGACTGCCATATCC
AGGGATCCACCCCATAATCAGCATCCAAACGCTGACACCATTGCATACAC
TAGCAAGATTTTATCGAAAGGACCCAGATATAGCTGTCTCTTGTGAGACT
ATGCCGGGGCCTAGCAAACACAGAAGTGGATGCTCACAGN

NNTTCGATGATGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXCAAGTCCCTTGGAGAAAGGACGG
GAGGACAGTTACAGAAGACTTTGGTGTGACTGTTGTCAGGAACCATGGAT
GTGATTAATGCTTTACTGTGGAAATCGATCAAAATGTGTCTATGTTCGAC
TGGTGACCTGTGCAGTTCTCTCATTCTGTGTCCCCAAACAAATAACATCT
CTAATCTTTCTGTTCTCTGGCTGTAAAACAGGCTCGATAACTGTATTCAC
AGTTGGGTATAGTGGCTGTCCTGTATTTTCAGAACTTGGCAGGCTTGCAC
AAGAGGTTGCCAAAAGTTCAAGGCCAGTCTGAGCTAGAGACTGAGAGCCC
AGGTTACAGAGAAGGACCTTTTCTCAAAAAACAAACAGATAACAACAATG
ATATTTGTACCTGTGATGTTCTGATAATAAGATGAAATAAGAGGAGCATT
GTACTTAGAACAATGCCAACAAAATGTTAACTAAGAACAATAATGATTTC
CTAGTAACACCAGAGTAGACACCAAATCACTGAAGACCACTAATCTAATG
GTCTCGAGTTCCATGTTTAGCAAAATCATTTCACTGTTGAAATGGTTCCC
TTACAGTGCTGACGTTAGCCCCTCCTGTGCTCGTTTTTAAGTAGCATATG
TTTAGAGCCACCTATGATTTAATATTAGAAAAAGCATTACCTTTAAGTGC
ATAATATTTGGGTCAGCACTCTTG

Query= MSMg01no507_f19.g1 MSMg01no507_f19.g1 CHROMAT_FILE:
MSMg01no507_f19.g1 PHD_FILE: MSMg01no507_f19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:35:53 2005
         (555 letters)



>mm_chr1_51568941_51569895
          Length = 955

 Score = 1052 bits (544), Expect = 0.0
 Identities = 550/552 (99%)
 Strand = Plus / Plus

                                                                       
Query: 4   gtcccttggagaaaggacgggaggacagttacagaagactttggtgtgactgttgtcagg 63
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 gtcccttggagaaaggacgggaggacagttacagaagactttggtgtgactgttgtcagg 263

                                                                       
Query: 64  aaccatggatgtgattaatgctttactgtggaaatcgatcaaaatgtgtctatgttcgac 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 aaccatggatgtgattaatgctttactgtggaaatcgatcaaaatgtgtctatgttcgac 323

                                                                       
Query: 124 tggtgacctgtgcagttctctcattctgtgtccccaaacaaataacatctctaatctttc 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tggtgacctgtgcagttctctcattctgtgtccccaaacaaataacatctctaatctttc 383

                                                                       
Query: 184 tgttctctggctgtaaaacaggctcgataactgtattcacagttgggtatagtggctgtc 243
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 384 tgttctctggctgtaaaacaggctcaataactgtattcacagttgggtatagtggctgtc 443

                                                                       
Query: 244 ctgtattttcagaacttggcaggcttgcacaagaggttgccaaaagttcaaggccagtct 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ctgtattttcagaacttggcaggcttgcacaagaggttgccaaaagttcaaggccagtct 503

                                                                       
Query: 304 gagctagagactgagagcccaggttacagagaaggaccttttctcaaaaaacaaacagat 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 gagctagagactgagagcccaggttacagagaaggaccttttctcaaaaaacaaacagat 563

                                                                       
Query: 364 aacaacaatgatatttgtacctgtgatgttctgataataagatgaaataagaggagcatt 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 564 aacaacaatgatatttgtacctgtgatgttctgataataagatgaaataagaggagcatg 623

                                                                       
Query: 424 gtacttagaacaatgccaacaaaatgttaactaagaacaataatgatttcctagtaacac 483
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 gtacttagaacaatgccaacaaaatgttaactaagaacaataatgatttcctagtaacac 683

                                                                       
Query: 484 cagagtagacaccaaatcactgaagaccactaatctaatggtctcgagttccatgtttag 543
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 cagagtagacaccaaatcactgaagaccactaatctaatggtctcgagttccatgtttag 743

                       
Query: 544 caaaatcatttc 555
           ||||||||||||
Sbjct: 744 caaaatcatttc 755


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 555
Length of database: 955
Length adjustment: 10
Effective length of query: 545
Effective length of database: 945
Effective search space:   515025
Effective search space used:   515025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)