XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTTAAA
ATTATATCTATTTATTAAGCACTTTAATACTGGGACTCTTATTAGGCCAT
TTTCTGATTGTCAAAACTGCAATGAGACCTCTGTCAGTCTCCCGTGAGTC
ACTATTTAATTGCTTCTTTTTTTTAATTGCTTCTTGATAGTAACCAAACT
TCTACTAATATGACACATTCCAAGAGGTTGTAAAACAATTACCAAAGGTC
ATAAAAAGGGAACTAATGATTTATTTATAAGTACTAGGACAGATATAAAA
TATTGACTAGGTTTATCCATATAAATCTTCACTAATAACTTAGTTATGGT
TTTTAACTTTCAATGAACCTGCAGAGCTGTGACAGGTGATGAATATTTAG
CCAGATAATTATTCTTAATAGATATGCATGTAAACATTCTCTGTTGCAAA
CTTCAATTTCGTTTTATGATTGGAATTTTATGTGTGAACTTGTGATGAAC
TTTCTACCATGTGATTATACATTCTGGAAAGATGTGTATGTGCCTCCAAA
GCACTAATACAACGAGAAGGGTCAGGAACTGAACTGAGGGGAACTTTTTT
GGACAGAATACTTCTTAGACAAAGAACAGAAGCAAGAGGAATTTTTCCCT
TGACCTCCTTAGCAACTCTTTGCCTTGCCTCCTTTTCTGTGATAGCTTTC
ATAGGAAACCTTTTACCACTTAGTTATAAATGATAT

NCCATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXTTTGATTCCCTTTGAACTTAAGGATG
GCATTTAACCTCTGATATCTGTGTGCCCATTTTAACCGCACTTTTTGTTA
TATATTTGCTTATTTAGTTATTCACACACACAGATACACAGACACACACA
CACAAACATATTCTTAAGCAAAGAATGCTACTTATACACATACACACACA
TATATTCTTAAGCAAAGAATGCTATTTAAGTGGGAAATTTTATAATTATT
AAAATTTTGACAATATTCTTTTTTGAATATACAAAGTCTTTTAAATAATA
ATTTCTCTGAATGCTCCATTAAAAATGAACCTATGTTGTGTTTCCTCTAA
TACTGCTTTTATTCTTGTGCTTATGGGGTATACAATCATGCAATAATGAA
CATATGCATATGTATCGAATAATATATTTTCTTTTTAATATCTATCCCTT
TCTGAAATGCAGACCAATGTAGTAGATGGGCTTGGTTCTGTTTGCATGTT
GATAATAATTCTGCCTTCCTGTGAGGGGTTGTGGACATGTAGTGAGTCAC
ACTCTGATGACTTCTTGTGACGCAATCCCCTAATGAATAAAGAAAACAAT
CACTGGGCAAGTAGACAGGACTTCCGTGTTGGAGAAGACAAGAGAGTGAT
GGAGGAGGAGCTAGAAGGAAAGTTTAGCAGAAGCATGTGGNCTGGAGAAA
CCACAGTTC

Query= MSMg01no507_n03.g1 MSMg01no507_n03.g1 CHROMAT_FILE:
MSMg01no507_n03.g1 PHD_FILE: MSMg01no507_n03.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:36:29 2005
         (610 letters)



>mm_chr1_112552751_112553760
          Length = 1010

 Score = 1180 bits (610), Expect = 0.0
 Identities = 610/610 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   tttgattccctttgaacttaaggatggcatttaacctctgatatctgtgtgcccatttta 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttgattccctttgaacttaaggatggcatttaacctctgatatctgtgtgcccatttta 260

                                                                       
Query: 61  accgcactttttgttatatatttgcttatttagttattcacacacacagatacacagaca 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 accgcactttttgttatatatttgcttatttagttattcacacacacagatacacagaca 320

                                                                       
Query: 121 cacacacacaaacatattcttaagcaaagaatgctacttatacacatacacacacatata 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cacacacacaaacatattcttaagcaaagaatgctacttatacacatacacacacatata 380

                                                                       
Query: 181 ttcttaagcaaagaatgctatttaagtgggaaattttataattattaaaattttgacaat 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttcttaagcaaagaatgctatttaagtgggaaattttataattattaaaattttgacaat 440

                                                                       
Query: 241 attcttttttgaatatacaaagtcttttaaataataatttctctgaatgctccattaaaa 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 attcttttttgaatatacaaagtcttttaaataataatttctctgaatgctccattaaaa 500

                                                                       
Query: 301 atgaacctatgttgtgtttcctctaatactgcttttattcttgtgcttatggggtataca 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 atgaacctatgttgtgtttcctctaatactgcttttattcttgtgcttatggggtataca 560

                                                                       
Query: 361 atcatgcaataatgaacatatgcatatgtatcgaataatatattttctttttaatatcta 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 atcatgcaataatgaacatatgcatatgtatcgaataatatattttctttttaatatcta 620

                                                                       
Query: 421 tccctttctgaaatgcagaccaatgtagtagatgggcttggttctgtttgcatgttgata 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tccctttctgaaatgcagaccaatgtagtagatgggcttggttctgtttgcatgttgata 680

                                                                       
Query: 481 ataattctgccttcctgtgaggggttgtggacatgtagtgagtcacactctgatgacttc 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ataattctgccttcctgtgaggggttgtggacatgtagtgagtcacactctgatgacttc 740

                                                                       
Query: 541 ttgtgacgcaatcccctaatgaataaagaaaacaatcactgggcaagtagacaggacttc 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 ttgtgacgcaatcccctaatgaataaagaaaacaatcactgggcaagtagacaggacttc 800

                     
Query: 601 cgtgttggag 610
           ||||||||||
Sbjct: 801 cgtgttggag 810


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 610
Length of database: 1010
Length adjustment: 10
Effective length of query: 600
Effective length of database: 1000
Effective search space:   600000
Effective search space used:   600000
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)