GAAAANNAATCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXCGCGGAATTCTCAACTGAGTCAACTTGACAGTCAAGGAGCAACTAAA
GAAATGTTCGACATCCTTAGTCATCAGAGAAATGGAAATAAAAATAACCC
TGAGATTCCACCTCACACCAGTCAGAATGGCTAAGATCAAAAATTCATGT
GACAACAGATGCTGGTGAGGAGGTAGAGAAAGAATATTCCTTCATTGTTG
GTGGAATTGCAAGATGGTACAACCACTCTGGAAACCAGTCTGGCAATTCT
TCCGAAAATGGGACATAGTACAACCTGAGGACCCATCTATACCACTCCTG
GGTATATACCCAGAAGATGCTCTGATATATAACAAGGGCATATGCTCCAC
TGTGTTCATAGCTGCCTTATTTATAATATCCAGAAGCTAGAAAGAAACCA
GTTTTCCTTCAACAGAGGAATGGATACAGAAAGTGTGGCACATTCACACA
ATAGGGTACTACTCAGCTATTAAAAACAATGAGTTCATGAAACTCTTAGG
CAAAAGGATGGAACTAGAAAATATCATCCTGAATGAGGTAACCCAGTCAT
AAAAGAACACACAGGCATGCACTCACTGATAATTGGATATTAGCCCAAAA
GCTCAGAATACCCAAAATACAATTCATAAACCACAAGAAGCTCAAGAAGA
AGGAAGACTAAAGTGTGGGTGCTTCGGTCCTTCTTAGAAGGAGAGAT

TTCTATTTATACGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCAGGGTAACCATCT
TCTTCTGTGTGGTATAAAGTGTCATTACTCCTGAATGAATGGAGTCCAAC
AAATGGTTATAAGAACATCCTGTATGTGACAGTCATAAGCAGGCTATGGA
ATAAGTCTTTGATGTGGATAATAAGACCTATTGCTTAGTCCCTAAAAGAA
CTTGCCCACGCAAGGAAGGATTCACAGTAAAAAAAATACATGAGGAAGCT
AGTCTCTCTAGGAACCACTAAATTGTCAGTAAAGATAGGAAAGAAAGGGA
GAATGAGATGGAAATGTTGACTCTCCATTTCTTATGGTTAGCTATTAGTA
GGGAGAAATGATCCAAATTTGATATGTGCTAAATAGTTTCTCCTGGGATA
TAAAAGCTTAGAACTGAACACTAAGAAAACCAGAAAAAAGGTAGAAGTGA
TGCACTTCAAGTTTCACTTTAATATAGAATCCATGATTCAGCATGCAGAT
GGCACCAGTTGGAAACTGTGATAACTAGAAAGTGCTTTCTTCTGAATGGC
CTGATTGTGGAAAAGCTTTAACCCAAGAAATGAAGGGGGTTCTTAGTCTG
GTTCTTAGGCTCAGGGACACAGGGTAGATGGGTTCAATCTGGGATCTGCA
AAGTGGAGAAACAGTATAACTAACTACTGATCCCTCTTCAGACAAAG

Query= MSMg01no507_o23.g1 MSMg01no507_o23.g1 CHROMAT_FILE:
MSMg01no507_o23.g1 PHD_FILE: MSMg01no507_o23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:36:39 2005
         (571 letters)



>mm_chr1_47519309_47520279
          Length = 971

 Score =  992 bits (513), Expect = 0.0
 Identities = 560/581 (96%), Gaps = 10/581 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   cagggtaaccatcttcttctgtgtggtataaagtgtcattactcctgaatgaatggagtc 60
           ||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||
Sbjct: 191 cagggtaaccatcttcttctgtgtggtatgaagtgtcattactcctgaatgagtggagtc 250

                                                                       
Query: 61  caacaaatggttataagaacatcctgtatgtgacagtcataagcaggctatggaataagt 120
           || ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 251 cagcaaatggttataagaacatcctgtatgtgacagtcataagcaggctatgaaataagt 310

                                                                       
Query: 121 ctttgatgtggataataagacctattgcttagtccctaaaagaacttgcccacgcaagga 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 311 ctttgatgtggataataagacctattgcttagtccctaaaagaacttgcccacacaagga 370

                                                                       
Query: 181 aggattcacagtaaaaaaaatacatgaggaagctagtctctctaggaaccactaaattgt 240
           |||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 371 aggattcacagtaagaaaaatacatgaggaagctagtctctctaggaacctctaaattgt 430

                                                                       
Query: 241 cagtaaagataggaaagaaagggagaatgagatggaaatgttgactctccatttcttatg 300
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 431 cagtaaagataggaaagaaagggagaatgagatggaaatgttgactgtccatttcttatg 490

                                                                       
Query: 301 g--------tta--gctattagtagggagaaatgatccaaatttgatatgtgctaaatag 350
           |        |||  ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 gactatttcttatggctattagtagggagaaatgatccaaatttgatatgtgctaaatag 550

                                                                       
Query: 351 tttctcctgggatataaaagcttagaactgaacactaagaaaaccagaaaaaaggtagaa 410
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 551 tttctcctgggatataaaagcttagaactgaacaccaagaaaaccagaaaaaaggtagaa 610

                                                                       
Query: 411 gtgatgcacttcaagtttcactttaatatagaatccatgattcagcatgcagatggcacc 470
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 gtgatgcacttcaagtttcactttaatatagaatccatgattcagcatgcagatggcacc 670

                                                                       
Query: 471 agttggaaactgtgataactagaaagtgctttcttctgaatggcctgattgtggaaaagc 530
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 671 agttggaaactgtgataactagaaagtgctttcttctgaatagcctgattgtggaaaagc 730

                                                    
Query: 531 tttaacccaagaaatgaagggggttcttagtctggttctta 571
           |||||||||||||||||||| ||||||||||||||||||||
Sbjct: 731 tttaacccaagaaatgaaggaggttcttagtctggttctta 771


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 571
Length of database: 971
Length adjustment: 10
Effective length of query: 561
Effective length of database: 961
Effective search space:   539121
Effective search space used:   539121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)