ATTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCGAGAATCGGCGGAA
TTCCCTACTGTTTTCTACATAATTCTGCCACACATAGCATTTAACTTACC
CTGGTCATTCAGTCTAACTGAATTGTCTACTGAACAACTAACAGCCAGGC
ACAGTGCTCAGAGCTAATGTTCTCTTAAGAATTCCCTGCTGGGAGGCAGC
AAGTGTTCACCATCACTATTCTACATGGTAAGTGTTAAACTGGATGCTTC
AGACAGCTACAGGAGGGTGTGGGAAGGACCGTTAACTCTGATGTACAAGC
AGTAGCAGAGGGAAATGGGTGCATTATAAGGGGAGCTCCATTAGGAAAAT
CTTCTTGGATCATCTGAGATAGAAGACCAAGCTGGAATTGATTAGACAAG
GTGACTGTAATGGAAGATAGAAGAGAGAAGGCAAAGACCTAGAGGTGAGG
GGGAAGGACCCTGCAGAGAGGGAGACAAGTCATGGGAAATGAACACCTTC
ATTTTGGGTTTGTTTGGTCTGGGATGCCTGAGAGACTGAAAAACCCAAGT
CTAAACTTACATAAACATTCTGAACTAGAGACTTAAAAGCTTGAATCTGC
CACACTAATGCAGTATTGAAGCAAGCAAAGGCTGATAAAATGATTAGGAG
GAAAAGAAGGGACAGTATACATTCATATAATGCATCAGTCTCTTCTTTAC
CTAGCCAGGTTTGTTCTGGATCTCTTTGGTAAG

ATGCTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXAAAATTAACTCAAATCAGTAGCCTTCC
TTTATACAAACAATTAACAGGCTGAGAAAGAAGTTAGGGAGACAATACCT
TCATAATAGCCGCAAACAATATTAAATATCTTGGTGTAACTCTAACAAAG
CAAGTAAATGATTTATATGACAAGAACTACAAGTCTCTGAAAAAAGAAAT
TGAAGATTTCAAAAGATTGATAGACCTTGCATGCTCATGAATTGGTAGGA
TTAACATATGTAAATAGCCATCTTACCAAAATCAATCTACAGCTATATAG
ATTCAATGCACTTTCTATCAAAATTCCAACAGAACTGTAGACCTTGAAAG
AACAATTCTCAACTTCAAAAATCTCAGGAGCGCTAAAACAATCCAGTATA
ATAAAAGAACTTCTAGAGGTATCATCATCCAAGCTATACTTCAGAGTAAT
AGTAATAAAAACTGCATGGTATTGGTGTAGACATGGACAGCTTAATCATT
GGAATTGAATCAAAGACACAGAAATAAATTCCCACAACCTCAGATGTTTG
ATTTTCTGACATAGAAGAGAAAACCATGTAGTACAAAACGGAGAGCTTCT
TTAACAATGGTGCTGGTCTAACTGAGTGTCTGCATGCAGAAGAATGCAAA
TAGATCCAAACGTATCACCATGCATAAAACTCAAGTCCAAGTGGCTCTAA
A

Query= MSMg01no514_i07.b1 MSMg01no514_i07.b1 CHROMAT_FILE:
MSMg01no514_i07.b1 PHD_FILE: MSMg01no514_i07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:45:27 2005
         (574 letters)



>mm_chr1_131049540_131050513
          Length = 974

 Score = 1064 bits (550), Expect = 0.0
 Identities = 568/574 (98%)
 Strand = Plus / Minus

                                                                       
Query: 1   ctgccacacatagcatttaacttaccctggtcattcagtctaactgaattgtctactgaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 774 ctgccacacatagcatttaacttaccctggtcattcagtctaactgaattgtctactgaa 715

                                                                       
Query: 61  caactaacagccaggcacagtgctcagagctaatgttctcttaagaattccctgctggga 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 714 caactaacagccaggcacagtgctcagagctaatgttctcttaagaattccctgctggga 655

                                                                       
Query: 121 ggcagcaagtgttcaccatcactattctacatggtaagtgttaaactggatgcttcagac 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 654 ggcagcaagtgttcaccatcactattctacatggtaagtgttaaactggatgcttcagac 595

                                                                       
Query: 181 agctacaggagggtgtgggaaggaccgttaactctgatgtacaagcagtagcagagggaa 240
           |||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 594 agctgcaggaaggtgtgggaaggaccgttaactctgatgtacaagcagtagcagagggaa 535

                                                                       
Query: 241 atgggtgcattataaggggagctccattaggaaaatcttcttggatcatctgagatagaa 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 534 atgggtgcattataaggggagctccattaggaaaatcttcttggatcatctgagatagaa 475

                                                                       
Query: 301 gaccaagctggaattgattagacaaggtgactgtaatggaagatagaagagagaaggcaa 360
           ||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||
Sbjct: 474 gaccaagctggaattgattagacaaggtgactgtagtggaagatagaatagagaaggcaa 415

                                                                       
Query: 361 agacctagaggtgagggggaaggaccctgcagagagggagacaagtcatgggaaatgaac 420
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 414 agacctagaggtgagggggaaggaccctgcagagagggagacaagtcacgggaaatgaac 355

                                                                       
Query: 421 accttcattttgggtttgtttggtctgggatgcctgagagactgaaaaacccaagtctaa 480
           | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 354 atcttcattttgggtttgtttggtctgggatgcctgagagactgaaaaacccaagtctaa 295

                                                                       
Query: 481 acttacataaacattctgaactagagacttaaaagcttgaatctgccacactaatgcagt 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 294 acttacataaacattctgaactagagacttaaaagcttgaatctgccacactaatgcagt 235

                                             
Query: 541 attgaagcaagcaaaggctgataaaatgattagg 574
           ||||||||||||||||||||||||||||||||||
Sbjct: 234 attgaagcaagcaaaggctgataaaatgattagg 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 574
Length of database: 974
Length adjustment: 10
Effective length of query: 564
Effective length of database: 964
Effective search space:   543696
Effective search space used:   543696
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)