Query= MSMg01no515_e06.b1 MSMg01no515_e06.b1 CHROMAT_FILE:
MSMg01no515_e06.b1 PHD_FILE: MSMg01no515_e06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:46:30 2005
(657 letters)
>mm_chr1_140496031_140497086
Length = 1056
Score = 1224 bits (633), Expect = 0.0
Identities = 648/653 (99%), Gaps = 1/653 (0%)
Strand = Plus / Minus
Query: 5 gaattctacagtaggtttaataaggttggtcattagacgaggctgaagacctactttata 64
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 856 gaattctacagtaggattaataaggttggtcattagacgaggctgaagacctactttata 797
Query: 65 aattgcccagtgctgagaagtagcactgtaataactggaatgagaaaagtaatattctta 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 796 aattgcccagtgctgagaagtagcactgtaataactggaatgagaaaagtaatattctta 737
Query: 125 taactggaataacaaaaggcatgggggctgccttcatagttagatttctaaaccttggtt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 736 taactggaataacaaaaggcatgggggctgccttcatagttagatttctaaaccttggtt 677
Query: 185 tctaaatctgggctttaaattttttatagtaactgaatagagagcttctaatccgtgtca 244
||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||
Sbjct: 676 tctaaatctgggctttaaa-tttttatagtaactgaataaagagcttctaatccgtgtca 618
Query: 245 ttgaattaaatcttctaatctgtgtcattgaattgctgtactaaagcctgccagaattag 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 ttgaattaaatcttctaatctgtgtcattgaattgctgtactaaagcctgccagaattag 558
Query: 305 ggccaaaagaatattttgatcatatattcaccaagctttgtccaccagactaccaggctt 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 ggccaaaagaatattttgatcatatattcaccaagctttgtccaccagactaccaggctt 498
Query: 365 tcccaaagcaataatctagattgattagaaatgtatagttagaacagtctggagaaagat 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 tcccaaagcaataatctagattgattagaaatgtatagttagaacagtctggagaaagat 438
Query: 425 gcataaagccatctttgggcatagtccagtgcactttagcatatttaggaacctggtagc 484
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 437 gcataaagccatctttgggcatagtccagtgcacttcagcatatttaggaacctggtagc 378
Query: 485 tcagtatcttttagattcacttggcatggatgctgcccttttgtattttggttataaaat 544
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 377 tcagtatcttttagattcacttggcatggatgctgcccttttgtagtttggttataaaat 318
Query: 545 accagttaataagtcataggagattgaaaaagtaggctttggaaagcatgaatataaatt 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 accagttaataagtcataggagattgaaaaagtaggctttggaaagcatgaatataaatt 258
Query: 605 tacaaatctgtcataaaaattaaaacaataaaacatgcactgagcctgtgaga 657
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 tacaaatctgtcataaaaattaaaacaataaaacatgcactgagcctgtgaga 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 657
Length of database: 1056
Length adjustment: 10
Effective length of query: 647
Effective length of database: 1046
Effective search space: 676762
Effective search space used: 676762
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no515_e06.g1 MSMg01no515_e06.g1 CHROMAT_FILE:
MSMg01no515_e06.g1 PHD_FILE: MSMg01no515_e06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:46:30 2005
(634 letters)
>mm_chr1_140322614_140323647
Length = 1034
Score = 965 bits (499), Expect = 0.0
Identities = 563/591 (95%), Gaps = 14/591 (2%)
Strand = Plus / Plus
Query: 1 cagacgagcttaagatacagtgttagatcttgtctcaagcaaagatagtgggagtgggga 60
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 201 cagacgagcttaagatacagtgttagatcttgtctcaaacaaagatagtgggagtgggga 260
Query: 61 gagtaactctggaaaaatatagaaattaacaacacaaagaagaaccatggacacttaggc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gagtaactctggaaaaatatagaaattaacaacacaaagaagaaccatggacacttaggc 320
Query: 121 acagatagattgcctgatgaagagtcccctaaggctaagatccagacttggttgacaaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acagatagattgcctgatgaagagtcccctaaggctaagatccagacttggttgacaaag 380
Query: 181 gcatggtcatggttttctaaatgacggagaagtcaccatagtgccctcttggtggaacat 240
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 381 gcatggtcatggttttctaaatgacggagaagtcaccatagtgccctcctggtggaacat 440
Query: 241 gcaagaaaccaaccctccaaggtggcaaggagtatagagatatacctcttaataagccaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gcaagaaaccaaccctccaaggtggcaaggagtatagagatatacctcttaataagccaa 500
Query: 301 ccaaatgggtgtttgtttactattggagaaactaacaagcctttaagactcagagttgta 360
||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||
Sbjct: 501 ccaaatgggtgtttgtttactattggaaaaactaacacgcctttaagactcagagttgta 560
Query: 361 atatgcctgcatagaagtagctatgtgctttatcaacatgagaaacaggaagcaaaggct 420
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 atatgcctgcatagaagtagctatgtgctttatcaacatgagaaacaggaagcaaaggcc 620
Query: 421 tgtcttcctgtaatgtttcaccactgccctctgctatcaaagtctaacgttgtgacagct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tgtcttcctgtaatgtttcaccactgccctctgctatcaaagtctaacgttgtgacagct 680
Query: 481 gacaat-aa-----------ataaataaataaa-caaacaaacaaacaaacaaacaaaca 527
|||||| || |||||| |||||| ||| ||| ||| ||| ||| ||| |
Sbjct: 681 gacaatcaatcaatcaatcaataaatcaataaatcaat-aaataaataaataaataaata 739
Query: 528 aacaaacaacaaaatggaccaagatcctttcactagagcaagcaatgaatt 578
|| ||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 aataaataacaaaatggaccaagatcctttcactagagcaagcaatgaatt 790
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 634
Length of database: 1034
Length adjustment: 10
Effective length of query: 624
Effective length of database: 1024
Effective search space: 638976
Effective search space used: 638976
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
