Query= MSMg01no515_g21.b1 MSMg01no515_g21.b1 CHROMAT_FILE:
MSMg01no515_g21.b1 PHD_FILE: MSMg01no515_g21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:46:44 2005
(505 letters)
>mm_chr1_164847734_164848642
Length = 909
Score = 919 bits (475), Expect = 0.0
Identities = 499/515 (96%), Gaps = 14/515 (2%)
Strand = Plus / Minus
Query: 5 gaattccattctgtgtcctttataagggactaattccgttgtc----------ttttttt 54
|||||||||||||||| ||||||||||||||||||||||||| |||||||
Sbjct: 762 gaattccattctgtgtggtttataagggactaattccgttgtcttttttttttttttttt 703
Query: 55 tttttttggtgtttctctccacacacgttttccagacacatgtgtcctgccaactacaaa 114
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 702 tttttttggtgtttctctccacacacgttttccagacacatgtgtcctgccaactacaaa 643
Query: 115 tgaaatgatggatgacattgatgagaaaatgggcaagaaactcaagtggtaatcaattac 174
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 642 tgaaatgatggatgacattgatgagaaaatgggcaagaaactcaagtggtaatcaattac 583
Query: 175 acttgctaatccaataaattctaaatt----tttatgcatcgaaaacatcaataaggtct 230
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 582 acttgctaatccaataaattctaaatttttctttatgcatcgaaaacatcaataaggtct 523
Query: 231 ttaatgttgccagcagtagcagttcgttattttttaattctggttatatctgatccacgt 290
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 522 ttaatgttgccagcagtagcagttcgttattttttaattctggttatatctgatccacgt 463
Query: 291 taggtgggaaaacactttcttcccctgtcaacttgcaagagagtgattgtgccctccagg 350
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 taggtgggaaaacactttcttcccctgtcaacttgcaagagagtgattgtgccctccagg 403
Query: 351 gagcatgtggtgaaaatgaggtctgcaaatagaattggaagccagaagtttcctataagt 410
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 gagcatgtggtgaaaatgaggtctgcaaatagaattggaagccagaagtttcctataagt 343
Query: 411 agaacccctgggtgctgaagccgtcctgtatcacaaagcacagtattgaaaccatagttc 470
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 agaacccctgggtgctgaagccgtcctgtatcacaaagcacagtattgaaaccatagttc 283
Query: 471 aatagttccggaagaaactagctggctggaaatta 505
|||||||||||||||||||||||||||||||||||
Sbjct: 282 aatagttccggaagaaactagctggctggaaatta 248
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 505
Length of database: 909
Length adjustment: 10
Effective length of query: 495
Effective length of database: 899
Effective search space: 445005
Effective search space used: 445005
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no515_g21.g1 MSMg01no515_g21.g1 CHROMAT_FILE:
MSMg01no515_g21.g1 PHD_FILE: MSMg01no515_g21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:46:44 2005
(580 letters)
>mm_chr2_101805593_101806572
Length = 980
Score = 1075 bits (556), Expect = 0.0
Identities = 574/580 (98%)
Strand = Plus / Plus
Query: 1 agattgcttccaagacttcatgatgagggtaattgggagccagggcctgggtggcctttt 60
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 201 agattgcttccaagacttcatgatgagggtaattgggagctagggcctgggtggcctttt 260
Query: 61 cagaactctgctcaattatgttatcacttaaaaaaacatcaagggacgagtgctctgggc 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 261 cagaactctgctcaattatgttatcacttaaaaaaacatcaagggacgagtgctatgggc 320
Query: 121 atggagtgccagagtcccttcccaccactcccactgcagagcacagaatggtgttaagca 180
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atggagagccagagtcccttcccaccactcccactgcagagcacagaatggtgttaagca 380
Query: 181 aacaaagcaagaacaaacgccagggaagacaacacaggcgtgtagacttgaaatgaactg 240
|||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||
Sbjct: 381 aacaaagcaagaacaaacaccagggaagacagcacaggcgtgtagacttgaaatgaactg 440
Query: 241 acccactagagtcaaagcttgcagggggtggagtcccctcttctgcgaaaggcagagctt 300
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 441 acccactagagtcaaagcttgcagggggtggagtcccctcttctgcgaaaggaagagctt 500
Query: 301 tagcaatcctgggattcctctcaggacaatctcagctgctcctgcaaggaacttaaatga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tagcaatcctgggattcctctcaggacaatctcagctgctcctgcaaggaacttaaatga 560
Query: 361 atatcggtgcctcccagaattcgctgagtaagggctgtgcagaattactatttctattgc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 atatcggtgcctcccagaattcgctgagtaagggctgtgcagaattactatttctattgc 620
Query: 421 ttactgtatctatttacctggagtgtttggtggaggctgtaaaattaaatgcttagcaga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ttactgtatctatttacctggagtgtttggtggaggctgtaaaattaaatgcttagcaga 680
Query: 481 cattctttaaactcaatggtcagttggtttctggtccagtaataaggcttgctgagttac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 cattctttaaactcaatggtcagttggtttctggtccagtaataaggcttgctgagttac 740
Query: 541 aatgcaatggtttattgagccttctgtgacagcggccagg 580
||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 aatgcaatggtttattgagccttctgtgacagcggccagg 780
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 580
Length of database: 980
Length adjustment: 10
Effective length of query: 570
Effective length of database: 970
Effective search space: 552900
Effective search space used: 552900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
