NCCTTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTTAGAGGATCCGC
GGAATTCCAGGAGTATGGTTACAAAATACAGCGCACGCCTTTAATCTCAG
CACTTGGGAGGCAGATACAGGTGGATCTCGGAGTTTCAGGACAGCCTGGT
CTACAGAGTGAGTTCTAGGACAGCCAAGGCTACACAGAGAAACCCTGTCT
CAAAAACCAAAAAAAAAACCAAACCAAACCAAAACAAACAAACAAACAAA
CAAACCCCCAAACCAAACCAACCAACCAAAAATATAACGATTTTATAACT
TCTGATACTTGGTTTACTTTTTTGTTTGTTTGTTTGTTTGTTTGTTTGTT
TTTGAGACAGGGTTTCCTTGTGTAGCTCTAGCTGTCCAGGAACTTGTTCT
GTAGACCAAGATAGCTTTAAGCTTAGATTCACCTGCCTCTGCCTCCCTGG
GATTAAAGGTGTGCCCAGCCTTTTTTCTTTTTCTTTTTTGGTTCCATAGC
CGAATCACAGGAGTCTTCCAATTATTAAAAGTGAAAAATTGCAAATATAG
CCAAGGCAAGCACTATAGTGGCTCATAACCATCTGTAACTCAGGTTACAG
GGAATCCAGCGCCTATGCCTTAGCAGGTACCTCCCTTCATGTGCATAGAG
AAATGTGTGCTCACGTGCTTATGCATGTGTGCACACACACATACACAAGC
ACACACAGTCCATGCATATATTCTCAAGCAAACGCTAATTGCATGAAAAA
TAAAATAAAAACTTAAGTATATT

NGGCAATGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXCTAGCCCAAATTTCCATTTTTC
TTCAGAGTGGTGCTTTCTGTATAGCCTACGGATGTCTGGATGCTGGGGAG
AAACTTGGCCATGGCTCCCCGAGTAGGAGAGCGGGAGAGAACCTTCAGGG
AGGCTCCGGGGTCTTTACCTTCCCACTTACTTGGCATAGGCTTTCTCCAG
CAGAGCACTCCAGAACTCATTGCCTTCTTCGGAGTGTAGGAAGAGCAGCT
GTCCATTCTTGGTGGGGAGCCGGTCATCAACGACCACCTCCACCCACTCT
CCATACTGCCAGAACTAGGGGTGGGAAACAGAACACGGATCACATGTAGA
AGCAGAGCCGGTCCTTCAGTGGCATCCTCGGATGCGGTTTCTGCAGTCAG
TGAGCAAGACTCCAACCTTCATGAGCCTTAAATGCCCCGAGAGAAGGCTT
TATGCCCCATCTGCACACAAGAGATGCCACAGACACCAAGAAGCACTTAG
CCTTTCTTGGAGTCTGTGGAGAAGAGAGCTTGCTCAAACATCACCCAGGG
AGCCAGAGTGGGTAACTCAGACACCCATCTCCTGGTCCTTAATCCACAGT
GATTCTCTTGGCCCATGGCCTGGAGGGAAAAGGAGACAGAATGAAGATGG
TTGGATAGATGTATAAAGGAATGGTTCTCACACTGGAGTGTGTATCCAAA
TCACCCAGAGGGATAATCTCACGTAG

Query= MSMg01no515_l13.g1 MSMg01no515_l13.g1 CHROMAT_FILE:
MSMg01no515_l13.g1 PHD_FILE: MSMg01no515_l13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:47:09 2005
         (587 letters)



>mm_chr1_184527205_184528191
          Length = 987

 Score = 1081 bits (559), Expect = 0.0
 Identities = 580/587 (98%)
 Strand = Plus / Minus

                                                                       
Query: 1   ctagcccaaatttccatttttcttcagagtggtgctttctgtatagcctacggatgtctg 60
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 787 ctagcccaaatttccatttctcttcagagtggtgctttctgtatagcctacggatgtctg 728

                                                                       
Query: 61  gatgctggggagaaacttggccatggctccccgagtaggagagcgggagagaaccttcag 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 727 gatgctggggagaaacttggccatggctccccgagtaggagagcgggagagaaccttcag 668

                                                                       
Query: 121 ggaggctccggggtctttaccttcccacttacttggcataggctttctccagcagagcac 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 667 ggaggctccggggtctttaccttcccacttacttggcataggctttctccagcagagcac 608

                                                                       
Query: 181 tccagaactcattgccttcttcggagtgtaggaagagcagctgtccattcttggtgggga 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 607 tccagaactcattgccttcttcggagtgtaggaagagcagctgtccattcttggtgggga 548

                                                                       
Query: 241 gccggtcatcaacgaccacctccacccactctccatactgccagaactaggggtgggaaa 300
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 gccggtcatcaatgaccacctccacccactctccatactgccagaactaggggtgggaaa 488

                                                                       
Query: 301 cagaacacggatcacatgtagaagcagagccggtccttcagtggcatcctcggatgcggt 360
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 487 cagaacacggatcacatgtagaagcagagccggtccttcagtggcatccttggatgcggt 428

                                                                       
Query: 361 ttctgcagtcagtgagcaagactccaaccttcatgagccttaaatgccccgagagaaggc 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 ttctgcagtcagtgagcaagactccaaccttcatgagccttaaatgccccgagagaaggc 368

                                                                       
Query: 421 tttatgccccatctgcacacaagagatgccacagacaccaagaagcacttagcctttctt 480
           ||||||||||||||||||||| || || ||||||||||||||||||||||||||||||||
Sbjct: 367 tttatgccccatctgcacacaggatataccacagacaccaagaagcacttagcctttctt 308

                                                                       
Query: 481 ggagtctgtggagaagagagcttgctcaaacatcacccagggagccagagtgggtaactc 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 ggagtctgtggagaagagagcttgctcaaacatcacccagggagccagagtgggtaactc 248

                                                          
Query: 541 agacacccatctcctggtccttaatccacagtgattctcttggccca 587
           ||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 247 agacacccatctcctggtccttagtccacagtgattctcttggccca 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 587
Length of database: 987
Length adjustment: 10
Effective length of query: 577
Effective length of database: 977
Effective search space:   563729
Effective search space used:   563729
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)