Query= MSMg01no517_i09.b1 MSMg01no517_i09.b1 CHROMAT_FILE:
MSMg01no517_i09.b1 PHD_FILE: MSMg01no517_i09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:49:38 2005
(688 letters)
>mm_chr1_24073542_24074628
Length = 1087
Score = 1299 bits (672), Expect = 0.0
Identities = 681/684 (99%), Gaps = 1/684 (0%)
Strand = Plus / Minus
Query: 5 gaattctgcattcttgtgactcagcttcttgaatactgggattacaactgcatgttgcca 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 910 gaattctgcattcttgtgactcagcttcttgaatactgggattacaactgcatgttgcca 851
Query: 65 tgcccagctatagaagtccaataaaattgctgtataaaattatctccatccttcatgtat 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 850 tgcccagctatagaagtccaataaaattgctgtataaaattatctccatccttcatgtat 791
Query: 125 aagaaacataaaattttgcctttagtcttgagtctcagccccagacatcattatatccac 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 790 aagaaacataaaattttgcctttagtcttgagtctcagccccagacatcattatatccac 731
Query: 185 atataagccagaaggtacaatgtataagtactgtgtatatgtctggatattccacagtct 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 730 atataagccagaaggtacaatgtataagtactgtgtatatgtctggatattccacagtct 671
Query: 245 caaaaagattaaaaacctaagcatttctaatcccaagcattctggataagaaatactcaa 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 670 caaaaagattaaaaacctaagcatttctaatcccaagcattctggataagaaatactcaa 611
Query: 305 cttgtatgtgtttttattccatatagttaggaagtgagatgggggctggagagatggctc 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 610 cttgtatgtgtttttattccatatagttaggaagtgagatgggggctggagagatggctc 551
Query: 365 agccgttcaaggctaggctcataaccaaaaatatagggaagcaagatggttagtaagaaa 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 agccgttcaaggctaggctcataaccaaaaatatagggaagcaagatggttagtaagaaa 491
Query: 425 ttctaaacatttgtcatataaacctgatattatagttttcaaagttataaaaataataac 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 ttctaaacatttgtcatataaacctgatattatagttttcaaagttataaaaataataac 431
Query: 485 acactaagcctaaatttaggctgagcacaaacagaccatttttgatatttaaagaaactt 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 430 acactaagcctaaatttaggctgagcacaaacagaccatttttgatatttaaagaaattt 371
Query: 545 actaaaaattagaattgttagcctagcatgtatctcacatatatacttactgttgaaata 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 actaaaaattagaattgttagcctagcatgtatctcacatatatacttactgttgaaata 311
Query: 605 aagccttttttgtaagtccactctcaagaaacagagagggggctggagagatggttcagc 664
||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 310 aagcc-tttttgtaagtccaccctcaagaaacagagagggggctggagagatggttcagc 252
Query: 665 tgttaaaaactgggctcacaacca 688
||||||||||||||||||||||||
Sbjct: 251 tgttaaaaactgggctcacaacca 228
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 688
Length of database: 1087
Length adjustment: 10
Effective length of query: 678
Effective length of database: 1077
Effective search space: 730206
Effective search space used: 730206
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no517_i09.g1 MSMg01no517_i09.g1 CHROMAT_FILE:
MSMg01no517_i09.g1 PHD_FILE: MSMg01no517_i09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:49:38 2005
(251 letters)
>mm_chr1_23933834_23934483
Length = 650
Score = 453 bits (234), Expect = e-132
Identities = 240/242 (99%), Gaps = 2/242 (0%)
Strand = Plus / Plus
Query: 1 aagttgattgtattaaggttggagtaggaagaaaggaagacagtgatacaaagcattggg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aagttgattgtattaaggttggagtaggaagaaaggaagacagtgatacaaagcattggg 260
Query: 61 ggtgagggggcggtgacaacattgctctcatataccaatatttgttggtttctaccccaa 120
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 g-tgagggggcggtgacaacattgctctcatataccaatatttgttggtttctaccccaa 319
Query: 121 tgataaccaaaatcttactatctatagtcgttgattgtgagggttttgtttgcctgtttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 tgataaccaaaatcttactatctatagtcgttgattgtgagggttttgtttgcctgtttt 379
Query: 181 tgtttgggggttgtcttgtttatttgttcgtttgttatgggtgggtggggtgggtgtttt 240
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 380 tgtttgggggttgtcttgtttatttgttcgtttgttatgggtgggtggg-tgggtgtttt 438
Query: 241 tt 242
||
Sbjct: 439 tt 440
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 251
Length of database: 650
Length adjustment: 9
Effective length of query: 242
Effective length of database: 641
Effective search space: 155122
Effective search space used: 155122
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
