GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTCTTCA
CCCCATAGGCCTGTTTCACTAATATGGCAGGTAGACATCTAACCTATTGT
TCAGAATACCAGAGTGCCTTTTGATTTTTCCTGAGGACATGTGAAGAAAC
ATCTCACCCTAGAGAAGGCACTCAGAACAGACCAACGTAACAACTCCACC
CCAGTTCTAGACTGATAACCCAATGTGTCTATCAGGTTACAAGAGCATGG
CCGAAGGATGGACTTAGAGGAGCATGGGTAACTCAAAGGTGTGGGCATTG
ATTCAGTGAAACGCCACCTCCCAGGATCTCCTGCATGACTTGCAGACAGT
GCCAATGGAGACTCTCCCTTCACACAAAGTTATACAAATTTGGGAGGGAC
TTTGTGACTCTTCAGTTTTGTGAACTTCCTGGGCCTCTTTAGTTTGCGAA
ATTTCCTGGGTATTGTAAGATTTCCTCTGTTTCATTTGGAGGAAATACCT
TCAGAAATTTCCACATGTAACTAAATACATGCATAGTATTTTACTAGGAT
ATTACTTAAGATTCTTAGGATTCACTTATTGCTATAAAACTGCAGAGGAA
TTTTTAATTTCATTATATTATGACTGCCGATTTATATTTGCATTAAAAAT
TCTAACTTTTTTCCATGAAACCATAGGTCATATGAATGCCCAGTAAATAA
GATGGATGAATAAAAAGATGGATAAGTAAAAATAGAGGAGTAAAAACAGT
AAATTGTTTGCTGAGTGGAGTCTTGGGTG

GGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXTTCACTTCCCTAGGAAAAGGGAAACTTCAGCTTGATTT
CTTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT
CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTCGTTCTTTTT
CTTTCTTTCTTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCATACATAC
TTCCTTCCTTCCTTCCTTCCTTCCTCCCTCCCTCCCTTCCTTCCTTTCCT
TCCTTCCTCTTTCCTTTATTCCTTTTGTCCTTCCTTCCTTCCTTCCTTCC
TTCCTTCCTTACATACATACTTACTTACTTCCTTCCTTCCTTCCTTCCTT
CCTTCCTTTTTCTTCTTTCTTTTGCCTGCATCAGAGTATTTATCAACTTT
GTGAACTCCCAGAGCATCAATGGTTAAGTACTGCACTAAAAGATGATCAG
ATGCTCCCAAGTGAAAGGAAGAACACGAGTCCTAGCACATTCCCTGATGA
TTGTTAGAGTCAACTGGCCCTAGAAGCTACACTGGCTATTCAATGTGGTA
TGTTATTCCACTTGATTCAATACCCTCACTTGCAATTGTTTCAGAAACTG
TTTTAAAACCATTAAGGTATAATAATTTCCTAAATGGAACGAAGTATGGA
AAAGAAATGATGTGGTTTGAAGGCTGTAATGAGGGGGAATCAAAACCGGG
AAGTGGATGGTTTCT

Query= MSMg01no517_m17.b1 MSMg01no517_m17.b1 CHROMAT_FILE:
MSMg01no517_m17.b1 PHD_FILE: MSMg01no517_m17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:50:00 2005
         (603 letters)



>mm_chr1_177249636_177250638
          Length = 1003

 Score = 1160 bits (600), Expect = 0.0
 Identities = 600/600 (100%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattctcttcaccccataggcctgtttcactaatatggcaggtagacatctaacctat 63
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattctcttcaccccataggcctgtttcactaatatggcaggtagacatctaacctat 263

                                                                       
Query: 64  tgttcagaataccagagtgccttttgatttttcctgaggacatgtgaagaaacatctcac 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tgttcagaataccagagtgccttttgatttttcctgaggacatgtgaagaaacatctcac 323

                                                                       
Query: 124 cctagagaaggcactcagaacagaccaacgtaacaactccaccccagttctagactgata 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 cctagagaaggcactcagaacagaccaacgtaacaactccaccccagttctagactgata 383

                                                                       
Query: 184 acccaatgtgtctatcaggttacaagagcatggccgaaggatggacttagaggagcatgg 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 acccaatgtgtctatcaggttacaagagcatggccgaaggatggacttagaggagcatgg 443

                                                                       
Query: 244 gtaactcaaaggtgtgggcattgattcagtgaaacgccacctcccaggatctcctgcatg 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 gtaactcaaaggtgtgggcattgattcagtgaaacgccacctcccaggatctcctgcatg 503

                                                                       
Query: 304 acttgcagacagtgccaatggagactctcccttcacacaaagttatacaaatttgggagg 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 acttgcagacagtgccaatggagactctcccttcacacaaagttatacaaatttgggagg 563

                                                                       
Query: 364 gactttgtgactcttcagttttgtgaacttcctgggcctctttagtttgcgaaatttcct 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 gactttgtgactcttcagttttgtgaacttcctgggcctctttagtttgcgaaatttcct 623

                                                                       
Query: 424 gggtattgtaagatttcctctgtttcatttggaggaaataccttcagaaatttccacatg 483
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 gggtattgtaagatttcctctgtttcatttggaggaaataccttcagaaatttccacatg 683

                                                                       
Query: 484 taactaaatacatgcatagtattttactaggatattacttaagattcttaggattcactt 543
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 taactaaatacatgcatagtattttactaggatattacttaagattcttaggattcactt 743

                                                                       
Query: 544 attgctataaaactgcagaggaatttttaatttcattatattatgactgccgatttatat 603
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 attgctataaaactgcagaggaatttttaatttcattatattatgactgccgatttatat 803


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 603
Length of database: 1003
Length adjustment: 10
Effective length of query: 593
Effective length of database: 993
Effective search space:   588849
Effective search space used:   588849
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)