NTTCCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGC
GGAATTCTACCCTAGTGGATCCTGGGTTGGCATCAGGCTATCCTGTTCGA
TTGCTGGAGCGATGAATCATCTTAAAGAATGGGCTGGGATAGGTGCCCTC
GCTGTGGCCCTTGTTTTGCATGCATGTTGTGTGTATGGTGTAGTTTTCGG
TTGTGGAATGCCCAGGTCTGCACTGCCGCCATGGTGGTGCAAGCTTTTGT
TGCAGTAGAAACAGGGCAGTTACCTCAGGTTTGGCTTGCTGCCATGAAGA
ACAATGAAGACCTTCGCTCCATAGGGTTGTAAGGCTCGGCACTGCACAGA
GGTTAGTCTGGAAGCTTTTTGATTATCTCTGGGAGGTATGTCTGATTGCA
TGAGGGTTGAGTGTCCTAGTTTCCTTCCCCCAGGAAAAACTGCATGGGAG
CAGGTCAGGATTGCTCTAGGTACCTATGAGCCTAAGAGCCAATCCTATAC
ATGGCCCCTATTTCTGCACACTGGGGATCAGACATCTATCTTCACCCATG
GAGCTTGCTTCAAAAGAATATAAAATGGGGAATTGTGGGAAGCCATTCTG
GACTCCCTGGCCAGCCCCGGCTGCACCCTAAGATGGTGCCTGACGGAAAT
CTGTGCCAGGCAGTAAACAAGCCTACATTTGGTGGATGACTTGCCCTTAA
TCCCTGATTGGCTGAGCAAGCCTGCCTGGTGTGGTGATGTAACCTGTGGT

NCCGTGGCTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXAAGGATGCAGGGTCCTCTGAAAAA
GAAATATTTTAAGTGTTATCATGCTCTAGGCTGGGGAAAAACTGATAGGA
GCAGTCTTCTGGCCAGGAGACAAATATAAACTAAGATTTAGCATACACAT
GAAGGAACAAAATTCATTGAATTCTGCATATAAAGTGCTGGACTTCAAAT
AGCCTGGTAAGTGTAAGGCCTGGACTTAGTTCATCTTGTCTTGCCTGTAA
GCAGGAGACATGATTTTTTCATGTTAGCTACACTATATGATGTTTATGGA
GGATGATGAATGTTGGCATTCTTTTTGCACTACTACTTCATCTTTTTCTT
TTATTGTCCTAAAATCACACACTGTAATCCTGCATATGATTTCCTTTGCT
TTTATAAAAGTACTTTTCTGTGTTGACAGCAGCTCAAATTGTAATTTTTC
TAAAGACTTCAGTGCTAAAAAAGTCTTATAATGTTTCCTATAAATTCTAC
TTCTTTTATATTTTGGAGAAACTTCCTGTGTAAGACAGAACAAAAATCTC
TTTAGATCTTCAAAGAGTGAAGAATATTTATGAGCCATAGTGTATTAAAG
TTAGTTAGTTAGTTAGCTAGTTAGTTAGTTAGTTAATTTGGCATTGGGCT
CAGGGGCTATTGTTTCTGCATTCTTCCTATGTGTTTTACCATTGAGTTAC
ACCCCTTAN

Query= MSMg01no518_e17.g1 MSMg01no518_e17.g1 CHROMAT_FILE:
MSMg01no518_e17.g1 PHD_FILE: MSMg01no518_e17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:50:39 2005
         (640 letters)



>mm_chr1_149211555_149212595
          Length = 1041

 Score =  953 bits (493), Expect = 0.0
 Identities = 508/513 (99%), Gaps = 1/513 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   aaggatgcagggtcctctgaaaaaga-aatattttaagtgttatcatgctctaggctggg 59
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 513 aaggatgcagggtcctctgaaaaagacaatattttaagtgttatcatgctctaggctggg 454

                                                                       
Query: 60  gaaaaactgataggagcagtcttctggccaggagacaaatataaactaagatttagcata 119
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 gaaaaactgataggagcggtcttctggccaggagacaaatataaactaagatttagcata 394

                                                                       
Query: 120 cacatgaaggaacaaaattcattgaattctgcatataaagtgctggacttcaaatagcct 179
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 cacatgaaggaacaaaattcattgaattctgcatataaagtgctggacttcaaatagcct 334

                                                                       
Query: 180 ggtaagtgtaaggcctggacttagttcatcttgtcttgcctgtaagcaggagacatgatt 239
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 ggtaagtgtaaggcctgcacttagttcatcttgtcttgcctgtaagcaggagacatgatt 274

                                                                       
Query: 240 ttttcatgttagctacactatatgatgtttatggaggatgatgaatgttggcattctttt 299
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 ttttcatgttagctacactatatgatgtttatggaggatgatgaatgttggcattctttt 214

                                                                       
Query: 300 tgcactactacttcatctttttcttttattgtcctaaaatcacacactgtaatcctgcat 359
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 213 tgcactactacttcatctttttcttttattgtcctaaaatcacacactgtaatcctgcat 154

                                                                       
Query: 360 atgatttcctttgcttttataaaagtacttttctgtgttgacagcagctcaaattgtaat 419
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 153 gtgatttcctttgcttttataaaagtacttttctgtgttgacagcagctcaaattgtaat 94

                                                                       
Query: 420 ttttctaaagacttcagtgctaaaaaagtcttataatgtttcctataaattctacttctt 479
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 93  ttttctaaagacttcagtgctaaaaaagtcttacaatgtttcctataaattctacttctt 34

                                            
Query: 480 ttatattttggagaaacttcctgtgtaagacag 512
           |||||||||||||||||||||||||||||||||
Sbjct: 33  ttatattttggagaaacttcctgtgtaagacag 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 640
Length of database: 1041
Length adjustment: 10
Effective length of query: 630
Effective length of database: 1031
Effective search space:   649530
Effective search space used:   649530
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)