Query= MSMg01no519_e20.b1 MSMg01no519_e20.b1 CHROMAT_FILE:
MSMg01no519_e20.b1 PHD_FILE: MSMg01no519_e20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:51:58 2005
(699 letters)
>mm_chr1_141176851_141177948
Length = 1098
Score = 1266 bits (655), Expect = 0.0
Identities = 685/695 (98%), Gaps = 1/695 (0%)
Strand = Plus / Plus
Query: 5 gaattccacatttctggttcaacaacctcagatcaacaatatgctgaaaaagttctgtat 64
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccacattcctggttcaacaacctcagatcaacaatatgctgaaaaagttctgtat 264
Query: 65 taaataagtacagacttctatctgatcatttccttacaacacagcagtatttattttcat 124
| ||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||
Sbjct: 265 ttaataagtacagacttctttctgatcatttccttacaacacagcaatatttattttcat 324
Query: 125 agcaccagactgctattgttattattggtgacctggaaatggtttaactatacaggtaga 184
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 agcaccagactgcgattgttattattggtgacctggaaatggtttaactatacaggtaga 384
Query: 185 tttatggaggatacatctcagtactaaggtaggatttgtatatctgaaggtgtcttggat 244
|||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 385 tttatggaggatgcatctcagtactaaggtaggatttgtatatctgaaagtgtcttggat 444
Query: 245 ccaatgctctgcagatatgagcaatgaccatatgtagtttaggatattggctttgtcact 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ccaatgctctgcagatatgagcaatgaccatatgtagtttaggatattggctttgtcact 504
Query: 305 atattaaaaaaaaattagctatataggaagagtagagaaaagaccccaggagctagcagc 364
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 atattaaaaaaaa-ttagctatataggaagagtagagaaaagaccccaggagctagcagc 563
Query: 365 agcacctgggtacttcccattgcatgtgatgagagtcttacatggagttactgtattcca 424
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 564 agcacctgggtacttcccattgcatgtgatgagagttttacatggagttactgtattcca 623
Query: 425 ttccagccttacaaatcatgtgctggcctcataccttatttctcatagcgctttaaattc 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 ttccagccttacaaatcatgtgctggcctcataccttatttctcatagcgctttaaattc 683
Query: 485 cagcacgtatggttgatgcctgtcattcccacacttgcaagggcagaggcagcataaggt 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 cagcacgtatggttgatgcctgtcattcccacacttgcaagggcagaggcagcataaggt 743
Query: 545 taaggcctagtggtctatgtaatgagttttatgtaagcctgggctacatagcatgaaatt 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 taaggcctagtggtctatgtaatgagttttatgtaagcctgggctacatagcatgaaatt 803
Query: 605 ggctaaacccaaaaacaactaagaaaaaaaccaaaccaaccaatgaacaacaacatcatc 664
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 ggctaaacccaaaaacaactaagaaaaaaaccaaaccaaccaatgaacaacaacatcatc 863
Query: 665 aacaacaacaacaaaaacacctacagaataaacac 699
| |||||||||||||||||||||||||||||||||
Sbjct: 864 atcaacaacaacaaaaacacctacagaataaacac 898
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 699
Length of database: 1098
Length adjustment: 10
Effective length of query: 689
Effective length of database: 1088
Effective search space: 749632
Effective search space used: 749632
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no519_e20.g1 MSMg01no519_e20.g1 CHROMAT_FILE:
MSMg01no519_e20.g1 PHD_FILE: MSMg01no519_e20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:51:59 2005
(648 letters)
>mm_chr1_141374612_141375659
Length = 1048
Score = 1222 bits (632), Expect = 0.0
Identities = 644/648 (99%)
Strand = Plus / Minus
Query: 1 tcatgtcataagcaaccttgtgtgccctgtaccatctctgaatcttcacagcggactgaa 60
||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||
Sbjct: 848 tcatgtcataagcaaccttctgtgccctgtaccatctctgaatcttcacagcagactgaa 789
Query: 61 gcatagtctggtatttcatcctctgactgtggcctctaaaaaccctctgaattgtaacag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 788 gcatagtctggtatttcatcctctgactgtggcctctaaaaaccctctgaattgtaacag 729
Query: 121 cagccgtagactgctgcttgatttgccggcgtactttgcagcctctgtaagctgcctgca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 728 cagccgtagactgctgcttgatttgccggcgtactttgcagcctctgtaagctgcctgca 669
Query: 181 aacaaatagctgctcctttgacctgcaagaagttcttcctttgactgatttgtgctctgt 240
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 aacaaatagctgctcttttgacctgcaagaagttcttcctttgactgatttgtgctctgt 609
Query: 241 aggcacagtagaaactctgaatgacaagagccgccttgcacatcttcaggtagcgctgcc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 aggcacagtagaaactctgaatgacaagagccgccttgcacatcttcaggtagcgctgcc 549
Query: 301 tcgctgttctcattctgaaataagactgtagagaaatggcagctttacgttgcaacctca 360
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 548 tcgctgttctcattctgaaataagactgtagagaaatggcagctttacattgcaacctca 489
Query: 361 actgctttctgaccaggcatcctctaaagtgtgactgcagtttgatacaggattcacgca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 actgctttctgaccaggcatcctctaaagtgtgactgcagtttgatacaggattcacgca 429
Query: 421 cctgtatgtactcttttctcttttgtgaggccagtttttgggaacggtaccaccgctgga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 cctgtatgtactcttttctcttttgtgaggccagtttttgggaacggtaccaccgctgga 369
Query: 481 taaacagtgcagctgctcttatttgtaaatactgcttccgtgattgtttcattttgacaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 taaacagtgcagctgctcttatttgtaaatactgcttccgtgattgtttcattttgacaa 309
Query: 541 ttgactgcagctttattgtggcatttttgaagttctgaaatgtcttcctacatatataag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 ttgactgcagctttattgtggcatttttgaagttctgaaatgtcttcctacatatataag 249
Query: 601 cccgataatatgactgaatctttataacggatgctaaagcatggcgaa 648
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 cccgataatatgactgaatctttataacggatgctaaagcatggcgaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 648
Length of database: 1048
Length adjustment: 10
Effective length of query: 638
Effective length of database: 1038
Effective search space: 662244
Effective search space used: 662244
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
