GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTTTGTT
CTTCTCTGAGCCCCATTTTTTAATGGGGTTATTTGATTTTCTGAAGTCCA
CCTTCTTGAGTTCTTTATATATGTTGGATATTAGTCCCCTATCTGATTTA
GGATAGGTAACGATCCTTTCCCAATCTGTTGGTGGTCTTTTTGTCTTATT
GACGGTGTCTTTTGCCTTGCAGAAACTTTGGAGTTTCATTAGGTCCCATT
TGTCAATTCTCGATCTTACAGCACAAGCCATTGCTGTTCTGTTCAGGAAT
TTTTCCCCTGTGCCCATATCTTCAAGGCTTTTCCCCACTTTCTCCTCTAT
AAGTTTCAGTGTCTCTGGTTTTATGTGAAGATCCTTGATCCACTTAGATT
TGACCTTAGTACAAGGAGATAAGTATGGATTGATTCCCATTCTTCTACAC
GATAACAACCAGTTGTGCCAGCACCAATTGTTGAAAATGCTGTCTTTCTT
CCACTGGATAGTTTTAGCTCCCTTGTCGAAGATCAAGTGACCATAGGTGT
GTGGGTTCATTTCTGGGTCTTCAATTCTATTCCATTGGTCTACTTGTCTG
TCTCTATACCAGTACCATGCAGTTTTTATCACAATTGCTCTGTAGTAAAG
CTTTAGGTCTGGCATGGTGATTCCGCCAGAAGTTCTTTTATCCTTGAGAA
GACTTTTGCTATCCTAGGTTTTTTGTTATTCCAGACAAATTTTGCAATTG

GGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXCTTACATCTGGTAGCCAGTATTCCAAAGATTTGGTCC
TTATGTACTTTCTCTAGCTATTTGTTTTGTTTTTTCTTTACCTAGTGACA
TGTTAATATTGGTATGCGTCAAATCACCAGAACTAGCTGTTAAATTTCCA
CAGATGTTGAGCTATACATTTTATTAGTCACTCATTTTTATCAAATTATG
CAAATCAAGAATAGTGAAAGCAAAGTACGAAGTCACACTTTATCACGCTA
ATGATTTTGTTCCATGTCATTGTTATTTTGTTTTTCTGAGTTGTGTCCAT
GTGGAAACAATATATAGTGATTTGATTTTCAACTATGTTATTTTGAAATT
GGGCCTTAAGGGTATCATTCCTACTACCAAAGTTGGCCAGTCCTCGAAGT
CAGTGTTTGATTGGTGCTTTGATTCTTTAGAATTAAGAAAATGTAGGGGG
AGCCGGGCAGTGGTGGCGCACACCTTTAATCCTAGCACTTGGGAGGCAGA
GGCAGGCGGATTTCTGAGTTTGAGGCCAGCCTGGTCTACAGAGTGAGTTC
CAGGACAGCCAGGGCTATACACAGAAACCTTGTCTCGGAAAAAAAAGAAA
GGAAGGAAAGAAAGAGAAAGAAAAAAGAAAGAAAATAAATGTGGGGGGAA
AGGTTAATAGTGTTAACTCATTTGAAGAGCTTTTGGTTTCTGTGGCATTG
CAAAGCAACGAGGTAA

Query= MSMg01no519_j24.g1 MSMg01no519_j24.g1 CHROMAT_FILE:
MSMg01no519_j24.g1 PHD_FILE: MSMg01no519_j24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:52:23 2005
         (626 letters)



>mm_chr1_178975304_178976329
          Length = 1026

 Score = 1087 bits (562), Expect = 0.0
 Identities = 596/626 (95%), Gaps = 29/626 (4%)
 Strand = Plus / Minus

                                                                       
Query: 1   cttacatctggtagccagtattccaaagatttggtccttatgtactttctctagctattt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 637 cttacatctggtagccagtattccaaagatttggtccttatgtactttctctagctattt 578

                                                                       
Query: 61  gttttgttttttctttacctagtgacatgttaatattggtatgcgtcaaatcaccagaac 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 577 gttttgttttttctttacctagtgacatgttaatattggtatgcgtcaaatcaccagaac 518

                                                                       
Query: 121 tagctgttaaatttccacagatgttgagctatacattttattagtcactcatttttatca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 517 tagctgttaaatttccacagatgttgagctatacattttattagtcactcatttttatca 458

                                                                       
Query: 181 aattatgcaaatcaagaatagtgaaagcaaagtacgaagtcacactttatcacgctaatg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 457 aattatgcaaatcaagaatagtgaaagcaaagtacgaagtcacactttatcactctaatg 398

                                                                       
Query: 241 attttgttccatgtcattgttattttgtttttctgagttgtgtccatgtggaaacaatat 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 attttgttccatgtcattgttattttgtttttctgagttgtgtccatgtggaaacaatat 338

                                                                       
Query: 301 atagtgatttgattttcaactatgttattttgaaattgggccttaagggtatcattccta 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 atagtgatttgattttcaactatgttattttgaaattgggccttaagggtatcattccta 278

                                                                       
Query: 361 ctaccaaagttggccagtcctcgaagtcagtgtttgattggtgctttgattctttagaat 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 ctaccaaagttggccagtcctcgaagtcagtgtttgattggtgctttgattctttagaat 218

                                                                       
Query: 421 taagaaaatgtagggggagccgggcagtggtggcgcacacctttaatcctagcacttggg 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 217 taagaaaatgtagggggagccgggcagtggtggcgcacacctttaatcctagcacttggg 158

                                                                       
Query: 481 aggcagaggcaggcggatttctgagtttgaggccagcctggtctacagagtgagttccag 540
           ||||||||||||||||||||||||||||||||                            
Sbjct: 157 aggcagaggcaggcggatttctgagtttgagg---------------------------- 126

                                                                       
Query: 541 gacagccagggctatacacagaaaccttgtctcggaaaaaaaagaaaggaaggaaagaaa 600
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 -acagccagggctatacacagaaaccttgtctcggaaaaaaaagaaaggaaggaaagaaa 67

                                     
Query: 601 gagaaagaaaaaagaaagaaaataaa 626
           ||||||||||||||||||||||||||
Sbjct: 66  gagaaagaaaaaagaaagaaaataaa 41


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 626
Length of database: 1026
Length adjustment: 10
Effective length of query: 616
Effective length of database: 1016
Effective search space:   625856
Effective search space used:   625856
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)