ATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAA
TTCTTTCTGGTAATCTAAAGATAGCGGGATATTTGTTTAGGGATCATTAT
AAAGAGAGGTATTTACTACTCAGCTACAGCTCCTAGTTGGAAAGTACTGA
TGTGAATAAAAGTAATTTCAAGTGCATACTACTTAGGTCCTTTCATGTAT
TTTTATTTAAGCTTTTTTATAAGGGCTGCAAGTATTTGAAATCAAGATAA
AAGTATACTGGTAATATCCTCATGTATATAGTGTAGTCAATATATTTCTT
TCTCAGTTTTGCTTCTCAGTAGGATTAAGGCTAAAGATGAGTGCTGGAAT
GTTTATTTCACCAAATCTCCAAAAGTATGACACCACAATACAACTTAAAG
ATGGACTAAATTTTCACAGGAAAATATGAGTTTCCCATAAAGTTCATTTC
ATGAAATAAAAGCCGTGTTTTAATTCTGGGATTTTATTTTGCTTTTCAAA
TTCCTTTTTTCTTCTTCTTTGATTTAAGTTTTATTGCATTATGTTGAGAA
AAGATACATAGTTTCAATTTATCTTAATTTGTTAACATTTAAAAACATAT
TTTGAGTAAATAGACTTACATCACATTCTTCTTTCCCTTTTGTACCACAA
CTTCTCCTGGAGGGGACCTCCCCTTGAAAACCTGCAATAGCTTTCATTAT
TTTTATCATATTCTTTAAAATTTGTAAAATATTGAAACAATAAAAATGAG
TGTTATAAAAGGTGTTTGATATA

CATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXTCGCGATTCCAAGCCCATGGTCTGCTCAAGGACTT
TCTAGGACGTTGGAACACTGGTGAAGGCTTACCTATGTCAGAATTCAATC
TTAAAAGGCACTTATAATAAGATAATATTAAAAGAGAGCACGTGGATCCA
TACACCAGACTAACGCTGGAATAGGGTATGAGTATACGGGTTGAAGAGAA
CGCCAGACTCCAGGAGGTGAGTTTCTGTGAAACTCTCTGCCTCGTGAGTG
GCTTCCAGGCCTCTCAGCCTGTCAAGCTGACTTGACCGGAGTGCGTGGCA
ATCATCTTGATGGTCTTATAAAGCCAGTTTTAAAAGTCTTTAATGGCATA
AACTTTAAAAGGCCTTAAATTTTGTTAGGACTCATCTGGAATTAGAAACT
AGTAAAGTTTTTAATTTTTTTGCGTATGAATTGTGTAATATATCTGTGGA
ACAGTTCTAAAGTAAATGGGGACAAAATTCACTCAACCTTCATTACATCC
TATACAGTCTTTTTTCATTCACATAAAATAATCTTTTATGGGATTCTAGG
AATTATTTCTAACTGATCACAAATGACTTTGTCTTGTCAATTCTGATCAT
GGGTGTTTAGTCTTACAAAAGTCTTGCTTTGTAGACATATTATGTTATAT
GGCTTTTTCACACAGGAAGGAAATTATGCAAGTGAAAGACAAGAATTGAA
AGGTTATGTGGCCCAA

Query= MSMg01no520_c06.g1 MSMg01no520_c06.g1 CHROMAT_FILE:
MSMg01no520_c06.g1 PHD_FILE: MSMg01no520_c06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:53:06 2005
         (693 letters)



>mm_chr1_17423091_17424183
          Length = 1093

 Score = 1122 bits (580), Expect = 0.0
 Identities = 607/616 (98%)
 Strand = Plus / Minus

                                                                        
Query: 78   ttaaaaggcacttataataagataatattaaaagagagcacgtggatccatacaccagac 137
            ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 1093 ttaaaaggcacttataataagataatactaaaagagagcacgtggatccatacaccagac 1034

                                                                        
Query: 138  taacgctggaatagggtatgagtatacgggttgaagagaacgccagactccaggaggtga 197
            ||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 1033 taaagctggaatagggtatgagtatacgggttgaagagaacgccagactccaagaggtga 974

                                                                        
Query: 198  gtttctgtgaaactctctgcctcgtgagtggcttccaggcctctcagcctgtcaagctga 257
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 973  gtttctgtgaaactctctgcctcgtgagtggcttccaggcctctcagcctgtcaagctga 914

                                                                        
Query: 258  cttgaccggagtgcgtggcaatcatcttgatggtcttataaagccagttttaaaagtctt 317
            ||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 913  cttgatcggagtgcgtggcaatcatcttgatggtcttataaagccagtttttaaagtctt 854

                                                                        
Query: 318  taatggcataaactttaaaaggccttaaattttgttaggactcatctggaattagaaact 377
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 853  taatggcataaactttaaaaggccttaaattttgttaggactcatctggaattagaaact 794

                                                                        
Query: 378  agtaaagtttttaatttttttgcgtatgaattgtgtaatatatctgtggaacagttctaa 437
            ||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 793  agtaaagtttttacttttttcgcgtatgaattgtgtaatatatctgtggaacagttctaa 734

                                                                        
Query: 438  agtaaatggggacaaaattcactcaaccttcattacatcctatacagtcttttttcattc 497
            |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 733  agtaaatggggacaaaattcactcaacctttattacatcctatacagtcttttttcattc 674

                                                                        
Query: 498  acataaaataatcttttatgggattctaggaattatttctaactgatcacaaatgacttt 557
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 673  acataaaataatcttttatgggattctaggaattatttctaactgatcacaaatgacttt 614

                                                                        
Query: 558  gtcttgtcaattctgatcatgggtgtttagtcttacaaaagtcttgctttgtagacatat 617
            |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 613  gtcttgtcaattctgatcatggatgtttagtcttacaaaagtcttgctttgtagacatat 554

                                                                        
Query: 618  tatgttatatggctttttcacacaggaaggaaattatgcaagtgaaagacaagaattgaa 677
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553  tatgttatatggctttttcacacaggaaggaaattatgcaagtgaaagacaagaattgaa 494

                            
Query: 678  aggttatgtggcccaa 693
            ||||||||||||||||
Sbjct: 493  aggttatgtggcccaa 478


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 693
Length of database: 1093
Length adjustment: 10
Effective length of query: 683
Effective length of database: 1083
Effective search space:   739689
Effective search space used:   739689
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)