Query= MSMg01no520_f17.b1 MSMg01no520_f17.b1 CHROMAT_FILE:
MSMg01no520_f17.b1 PHD_FILE: MSMg01no520_f17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:53:23 2005
(695 letters)
>mm_chr1_155634707_155635801
Length = 1095
Score = 741 bits (383), Expect = 0.0
Identities = 383/383 (100%)
Strand = Plus / Minus
Query: 313 tggcggtccagttcatcagacttcatcagaaaggagtaaggactctgtccggagctggac 372
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1095 tggcggtccagttcatcagacttcatcagaaaggagtaaggactctgtccggagctggac 1036
Query: 373 taggagccatttgcatgatagtttgactaagagtacagcttcattctatctttgtcctga 432
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1035 taggagccatttgcatgatagtttgactaagagtacagcttcattctatctttgtcctga 976
Query: 433 gaatttgagtgaagttggattttaaagacagtggactggtttgtctggcagaggaggttt 492
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 975 gaatttgagtgaagttggattttaaagacagtggactggtttgtctggcagaggaggttt 916
Query: 493 caagatgggagcacgtttagtgtaataggaattaaactccagctagttcatataaaagac 552
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 915 caagatgggagcacgtttagtgtaataggaattaaactccagctagttcatataaaagac 856
Query: 553 acacacttcaggtattttccttacaggctgtaagcccagatcaggcagatttggagctat 612
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 855 acacacttcaggtattttccttacaggctgtaagcccagatcaggcagatttggagctat 796
Query: 613 tctaagtcacctctcagtcccttgtcatttgcagttcctggccatgtgcttatggtggct 672
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 795 tctaagtcacctctcagtcccttgtcatttgcagttcctggccatgtgcttatggtggct 736
Query: 673 cctccactctctacttcttttct 695
|||||||||||||||||||||||
Sbjct: 735 cctccactctctacttcttttct 713
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 695
Length of database: 1095
Length adjustment: 10
Effective length of query: 685
Effective length of database: 1085
Effective search space: 743225
Effective search space used: 743225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no520_f17.g1 MSMg01no520_f17.g1 CHROMAT_FILE:
MSMg01no520_f17.g1 PHD_FILE: MSMg01no520_f17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:53:23 2005
(603 letters)
>mm_chr1_155450793_155451795
Length = 1003
Score = 609 bits (315), Expect = e-178
Identities = 349/369 (94%), Gaps = 14/369 (3%)
Strand = Plus / Plus
Query: 1 tcttatccctatgaggcctgtcctgattcactccattctactggaaagcaatccacagcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcttatccctatgaggcctgtcctgattcactccattctactggaaagcaatccacagcc 260
Query: 61 actctgcttcctttttacaccaaccttcaaggtcttatctctttcatagatttttcatga 120
|||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||
Sbjct: 261 actctgcttcctttttacaccaaccttcaaggtcttatctctttgatagctttttcatga 320
Query: 121 ctaagtagacatttgtacagcctcccctatcctaaagaaaaaaacacatgccttgtttat 180
|||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||
Sbjct: 321 ctaagtagacatttgtacagcctcccctatccaaaagaaaaaaacacatgccctgtttat 380
Query: 181 catttgtgaaagaggaaaaacacccctctctgaaataccctatctagggctgtgtggttt 240
| ||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 381 cttttgtgaaagaggaaaaacacccctctct--------------agggctgtgtggttt 426
Query: 241 atttacaattatccacagaggactgattttgttgctgcatttatgtggaatgatcgctgt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 atttacaattatccacagaggactgattttgttgctgcatttatgtggaatgatcgctgt 486
Query: 301 gttaggctgtgtttatctggatactgcaatccccagaacattgacggagctaactgtggc 360
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 487 gttaggctgtgtttatctggatactgcaatccccagaacattgatggagctaactgtggc 546
Query: 361 tcagattcc 369
|||||||||
Sbjct: 547 tcagattcc 555
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 603
Length of database: 1003
Length adjustment: 10
Effective length of query: 593
Effective length of database: 993
Effective search space: 588849
Effective search space used: 588849
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
