TTTAAACTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTCAGAGGAT
CCGCGGAATTCTTTAAATATAAAAGAATGACAGCTCTATGTGACTATAAA
AGACTTTGTTTTCTTTTCTTCTTAGCAAGTAGAAAAAAACGTCCGAACTG
GTCAAATTCCAAAAGAAGACTGCAGAAAAAAAAGCCCCATCAAGATGAGA
TGATGGGTAAGGGGATGCTGGAGGAGACTCCAGCAAGGGGGTACAGGAGG
AGGCTTCAGCAAAGGCTGTAGATCTGATGGAGTTCGTTCTGAACTCACTG
GATAGGCAGGCACACAGGAGTTCTGGTCAGCACAGCGAACTGGCTTTAAA
TTTCACCAGACCTGTTTTGCCACTGAGTAAATGGTGAACTGGAACATGTT
GGAATCCTGTTCTGAGTTTACACAGCCCAAGGTGAAGGGTGCAGAGTGTC
AAGTTTCCTCTTTATTTATGCACACTAGGATGGCATCCATCCTTCCTAAC
TAAAGGGAGAGTAAATAAACTTTGCTACTTTGAGATAAGGTGCATAAGAG
CCTGGGTCCTAGCCCTGAGAGGCAGTTCAGAGGAAAAGCCCCCAGAAAAG
CTTCAGAAAGGTGTTCTCATGCCAGTGGATGCAGCTGTCCTTGGGGAGGC
AGCTTCCAAAGTCCCGAGAGGAAAAAGTGCTGTGTCCTCCCCTCCTCAGT
GAAGGCCACTCATCCATCCACCAGTCCTGTCCACTGCAGAGCCTCTGGGC
CTCTGTCACC

TTTTTCGATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCACCTGAGGAATACCGAA
TGGCAGAGAAGCACCTGAAAAAATGTTCAACATCCTTAATCATCAGGGAA
ATGCAAATCAAAACAACCCTGAGATTCCACCTCACACCAGTCAGAATGGC
TAAGTTCAAAAATTCAGGTGACAGCAGATGCTGGCTTGGATGTGGAGAAA
GAGGAACACTCCTCCATTGTTGGTGGGATTGCAGGCTTGTACAACCACTC
TGGAAATCAGTCTGGCGGTTCCTCAGAAAATTGGACATAGTACTACCAGA
GGATCCAGCAATACCTCTCCTGGGCATATATCCAGATGATGCCCCAACTG
GTAAGAAGGACACATGCTCCACTATGTTCATAGCAGCCTTATTTATAATA
GCCAGAAGCTGGAAAGAACCCAGATGCCCCTCAACAGAGGAATGGATACA
GAAAATGTGGTACATCTACACAATGGAGTACTACTCAGCTATTAAAAAGA
ATGAATTTATGAAATTCCTAGCCAAGTGGATGGACCTGGAGGGCATCATC
CTGAGTGAGGTAACACATTCACAAAGGAACTCACACAATATGTACTCACT
GATAAGTGGATATTAGCCCCAAACCTAGGATTCCCAAGATATAAGGTACA
ATTTGCTAAACACATGAAACTCAAGAAGAATGAAGACCTGAGTGTGGACA
CTATG

Query= MSMg01no522_n14.b1 MSMg01no522_n14.b1 CHROMAT_FILE:
MSMg01no522_n14.b1 PHD_FILE: MSMg01no522_n14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:56:34 2005
         (622 letters)



>mm_chr1_85279027_85280048
          Length = 1022

 Score = 1050 bits (543), Expect = 0.0
 Identities = 597/615 (97%)
 Strand = Plus / Plus

                                                                       
Query: 8   gaattctttaaatataaaagaatgacagctctatgtgactataaaagactttgttttctt 67
           |||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 208 gaattctttaaataaaaaagactgacagctctatgtgactataaaagactttgttttctt 267

                                                                       
Query: 68  ttcttcttagcaagtagaaaaaaacgtccgaactggtcaaattccaaaagaagactgcag 127
           |||||||||||||| |||||||||| ||||||||||||||||||||||||||||| ||||
Sbjct: 268 ttcttcttagcaagaagaaaaaaacatccgaactggtcaaattccaaaagaagacagcag 327

                                                                       
Query: 128 aaaaaaaagccccatcaagatgagatgatgggtaaggggatgctggaggagactccagca 187
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 aaaaaaaagccccgtcaagatgagatgatgggtaaggggatgctggaggagactccagca 387

                                                                       
Query: 188 agggggtacaggaggaggcttcagcaaaggctgtagatctgatggagttcgttctgaact 247
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 agggggtacaggaggaggattcagcaaaggctgtagatctgatggagttcgttctgaact 447

                                                                       
Query: 248 cactggataggcaggcacacaggagttctggtcagcacagcgaactggctttaaatttca 307
           ||||  ||||||||||||||| || |||| ||||||||||||||||||||||||||||||
Sbjct: 448 cactatataggcaggcacacaagatttcttgtcagcacagcgaactggctttaaatttca 507

                                                                       
Query: 308 ccagacctgttttgccactgagtaaatggtgaactggaacatgttggaatcctgttctga 367
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 ccagacctgttttgccactgagtaaatggtgaactggaacatgttggaatcctgttctga 567

                                                                       
Query: 368 gtttacacagcccaaggtgaagggtgcagagtgtcaagtttcctctttatttatgcacac 427
           | |||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||
Sbjct: 568 ggttacacagcccaaggtgaagggtgcagagtgtcaggtttcctctttatttatacacac 627

                                                                       
Query: 428 taggatggcatccatccttcctaactaaagggagagtaaataaactttgctactttgaga 487
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 628 taggatggcatccatccttcctaactaaaaggagagtaaataaactttgctactttgaga 687

                                                                       
Query: 488 taaggtgcataagagcctgggtcctagccctgagaggcagttcagaggaaaagcccccag 547
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 688 taaggtgcagaagagcctgggtcctagccctgagaggcagttcagaggaaaagcccccag 747

                                                                       
Query: 548 aaaagcttcagaaaggtgttctcatgccagtggatgcagctgtccttggggaggcagctt 607
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 748 aaaagcttcagaaaggtgttctcatgcctgtggatgcagctgtccttggggaggcagctt 807

                          
Query: 608 ccaaagtcccgagag 622
           |||||||||||||||
Sbjct: 808 ccaaagtcccgagag 822


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 622
Length of database: 1022
Length adjustment: 10
Effective length of query: 612
Effective length of database: 1012
Effective search space:   619344
Effective search space used:   619344
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)