Query= MSMg01no523_a10.b1 MSMg01no523_a10.b1 CHROMAT_FILE:
MSMg01no523_a10.b1 PHD_FILE: MSMg01no523_a10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:56:48 2005
(688 letters)
>mm_chr1_71490924_71492011
Length = 1088
Score = 1062 bits (549), Expect = 0.0
Identities = 603/621 (97%), Gaps = 4/621 (0%)
Strand = Plus / Minus
Query: 69 tttgccaatctatccacactaatcaatacatataatgttgttaatactcttcccatactg 128
||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||
Sbjct: 1085 tttgccaatctatccacactaattaatacatataatgttgttaatacttttcccatactg 1026
Query: 129 ccttgcataagtttatcacaatttttatttgtagtaattgaacataataatatttgtgta 188
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1025 ccttgcataagtttatcacaatttttatttgtagtaattgaacataataatatttgtgta 966
Query: 189 tgtatacattgctcatagttgggacattactaatgagtcctgtcattgtaccattttttt 248
||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||
Sbjct: 965 tgtatacattgctcatagttggggcattactaatgagtcctgtcattgtacca-tttttt 907
Query: 249 tgtttctttttttttttttctgtacaactttttt-ggtgggtccatcatcctgtaaagcc 307
|||||| || |||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 906 tgtttc-ttgtttttttttctgtacaacttttttaggtgggtccatcatcctgtaaagcc 848
Query: 308 acactagatgacatgtgtctacggtgcacaaaatctcagcagccatttctactaaacata 367
||||| ||||||||||||||| ||||||| |||||||||||||||||||||||||||| |
Sbjct: 847 acactggatgacatgtgtctatggtgcac-aaatctcagcagccatttctactaaacaga 789
Query: 368 cggctgaggccatttaacgatgttgtgtccccactcctctacttcgctttcaagtgtcca 427
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 788 cggctgaggccatttaacgatgttgtgtccccactcctctactttgctttcaagtgtcca 729
Query: 428 ctttaaaacttagatcatcaggaagagtccagcctgcgtcctgtcatctctcagcttccc 487
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 728 ctttaaaacttagatcatcaggaagagtccagcctgcatcctgtcatctctcagcttccc 669
Query: 488 ctgttgtgtggactcgcatcgcattcagggctcccagcctcctttccacatggctgaagg 547
||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 668 ctgttgtgtggactcccatcgcatccagggctcccagcctcctttccacatggctgaagg 609
Query: 548 acaaaggcctattgctcagtgctgggttcataacctgagttgcttctgtagttaatacgt 607
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 608 acaaaggcctattgctcagtgctgggttcataaactgagttgcttctgtagttaatacgt 549
Query: 608 tttactttctgctgtttcctctgccttatttctctattttaaagcatattaaagtttgat 667
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 548 tttactttctgctgttttctctgccttatttctctattttaaagcatattaaagtttcat 489
Query: 668 catttgcatattcttggagat 688
|||||||||||||||||||||
Sbjct: 488 catttgcatattcttggagat 468
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 688
Length of database: 1088
Length adjustment: 10
Effective length of query: 678
Effective length of database: 1078
Effective search space: 730884
Effective search space used: 730884
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no523_a10.g1 MSMg01no523_a10.g1 CHROMAT_FILE:
MSMg01no523_a10.g1 PHD_FILE: MSMg01no523_a10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:56:49 2005
(661 letters)
>mm_chr1_71430843_71431903
Length = 1061
Score = 1247 bits (645), Expect = 0.0
Identities = 657/661 (99%)
Strand = Plus / Plus
Query: 1 ttgctttcaagtttactacatatacagatcttcagtttccatgtggatcacagatgtctc 60
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 201 ttgctttcaagtttactacatatacagatcttcagtttccgtgtggatcacagatgtctc 260
Query: 61 cacacttacaagcagaataagttgcacaatggttgccatgaagttctggaagataaagac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cacacttacaagcagaataagttgcacaatggttgccatgaagttctggaagataaagac 320
Query: 121 gtaaggatgtatgtaaactattaccattggcataatgtgtgtgtgatgggagagttgtac 180
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtaaggatatatgtaaactattaccattggcataatgtgtgtgtgatgggagagttgtac 380
Query: 181 ccacgatacttaaagtatgaaatctgggctcaataccatttggtgtcaccaaatagggta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ccacgatacttaaagtatgaaatctgggctcaataccatttggtgtcaccaaatagggta 440
Query: 241 ggctggaggcaggtattcgagaaaacagtgcctgccgtgagatttgaaggacaagttgca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ggctggaggcaggtattcgagaaaacagtgcctgccgtgagatttgaaggacaagttgca 500
Query: 301 gacagctaagcaaatgacaaggaagggaaaaataatatatgcagaggcatgaatgtaaga 360
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 501 gacagctaagcaaatgacaaggaagggaaaaataatatatgcagaggcatgaatataaga 560
Query: 361 aaaccctggaggagcctgaagtagaatggacccccatggtaatgcattaacttgaattca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aaaccctggaggagcctgaagtagaatggacccccatggtaatgcattaacttgaattca 620
Query: 421 gatgtaaagcaattggctcacctggtcatttcattatccttgcaaaataggctactgtgc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gatgtaaagcaattggctcacctggtcatttcattatccttgcaaaataggctactgtgc 680
Query: 481 tgtacaacgactgaatattctagattccagttatagcaccagggcagcatttcctttatt 540
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tgtacaatgactgaatattctagattccagttatagcaccagggcagcatttcctttatt 740
Query: 541 tgggtgactgatgtgacatatgcagctactacagggagggcattgttaaaagagatggcc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tgggtgactgatgtgacatatgcagctactacagggagggcattgttaaaagagatggcc 800
Query: 601 cattcatagaaggtctagagtggtctatgatggcacctgacagccgtgttgatttggaag 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 cattcatagaaggtctagagtggtctatgatggcacctgacagccgtgttgatttggaag 860
Query: 661 g 661
|
Sbjct: 861 g 861
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 661
Length of database: 1061
Length adjustment: 10
Effective length of query: 651
Effective length of database: 1051
Effective search space: 684201
Effective search space used: 684201
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
