Query= MSMg01no523_m14.b1 MSMg01no523_m14.b1 CHROMAT_FILE:
MSMg01no523_m14.b1 PHD_FILE: MSMg01no523_m14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:57:49 2005
(364 letters)
>mm_chr1_72416187_72416950
Length = 764
Score = 652 bits (337), Expect = 0.0
Identities = 355/361 (98%)
Strand = Plus / Plus
Query: 4 ggaattcatcatatgcatttgtgtctaaatttgctgttgcttagtgacctcatcttaatt 63
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcatcatatgtatttgtgtctaaatttgctgttgcttagtgacctcatcttaatt 263
Query: 64 atgtctccaagggtcttatttccaagtacggtcacattgtcaggttctaaattggacatg 123
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 264 atgtctccaagggtcttatttccaagtaaggtcacattgtcaggttctaaattggacatg 323
Query: 124 aattttgggagaaatctatgcagctgattacagtattataaagggagattatacagaatg 183
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 aattttgggagaaatctatccagctgattacagtattataaagggagattatacagaatg 383
Query: 184 ataggactgggccttctgtagtaagggattctgtgctactgtgcaaagggtcggagacct 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ataggactgggccttctgtagtaagggattctgtgctactgtgcaaagggtcggagacct 443
Query: 244 cactgttgtggaaggaagagtccagtgagtgctcattatgtttgcaggcaggaacaatat 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 444 cactgttgtggaaggaagagtccagtgagtgctcattatgtttgcaggcaggaacaacat 503
Query: 304 gctcctctaaagcatatcatgcacggctgctcttcaggaaagccagtgcggtccctggag 363
|||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 gctcctctaaagcagaccatgcacggctgctcttcaggaaagccagtgcggtccctggag 563
Query: 364 g 364
|
Sbjct: 564 g 564
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 364
Length of database: 764
Length adjustment: 9
Effective length of query: 355
Effective length of database: 755
Effective search space: 268025
Effective search space used: 268025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no523_m14.g1 MSMg01no523_m14.g1 CHROMAT_FILE:
MSMg01no523_m14.g1 PHD_FILE: MSMg01no523_m14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:57:49 2005
(424 letters)
>mm_chr1_72571453_72572280
Length = 828
Score = 700 bits (362), Expect = 0.0
Identities = 404/420 (96%), Gaps = 5/420 (1%)
Strand = Plus / Minus
Query: 9 ttccttttcttctctttttctttttctcgtttttctattcattcattcattcgtttgttt 68
|||||||||||||||||||||||||||||||||| |||||||||||| |||| |||||||
Sbjct: 813 ttccttttcttctctttttctttttctcgttttt-tattcattcattaattcatttgttt 755
Query: 69 atttatttcaggcaaagtctgactatgctagaacttaccatgtagaccaggcttaacttc 128
|||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||
Sbjct: 754 gtttatttcaggcaaagcctgactatgctagaacttaccatgtagaccaggctggacttc 695
Query: 129 aactcactaagatacacctgcctctgcctcccaagtgctgggattaaaagtgtgtgccac 188
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 694 aactcacaaagatacacctgcctctgcctcccaagtgctgggattaaaagtgtgtgccac 635
Query: 189 caagtcataaagatttttgactctaggctgtgtgaagttggcagttgaagctaaccagaa 248
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 634 catgtcataaagatttttgactctaggctgtgtgaagttggcagttgaagctaaccagaa 575
Query: 249 tagaaactaaactccataaactggtgtttaggatgaatagaaacagtaaaaacagt---- 304
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 574 tagaaactaaactccataaaatggtgtttaggatgaatagaaacagtaaaaacagttagc 515
Query: 305 agtactgggttaggttacacaatgggacaaatgctcagggctagtctatgaagtttcaag 364
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 514 agtactgggttaggttacacagtgggacaaatgctcagggctagtctatgaagtttcaag 455
Query: 365 ttgtcttcggaattactgagaaagatagatgaaattattttccttgtttatagaaaggtt 424
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 454 ttgtcttcggaattactgagaaagacagatgaaattattttccttgtttatagaaaggtt 395
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 424
Length of database: 828
Length adjustment: 9
Effective length of query: 415
Effective length of database: 819
Effective search space: 339885
Effective search space used: 339885
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
