Query= MSMg01no523_o20.b1 MSMg01no523_o20.b1 CHROMAT_FILE:
MSMg01no523_o20.b1 PHD_FILE: MSMg01no523_o20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:58:00 2005
(713 letters)
>mm_chr1_130240042_130241154
Length = 1113
Score = 1274 bits (659), Expect = 0.0
Identities = 700/721 (97%), Gaps = 12/721 (1%)
Strand = Plus / Minus
Query: 5 gaattcattagtattttattcagttttattaatctacattgaattgagactcatcattag 64
||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 754 gaattcattagtaagttattcagttttattaatctacattgaattaagactcatcattag 695
Query: 65 ttggtgctttcagagcatccctagaatgttgattactgtgactagatcatcccagtttgt 124
||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 694 ttggtgctttcggagcatccctagaatgttgattactgtgactagaccatcccagtttgt 635
Query: 125 cgctttgctaacatctctaaacagatctatccatgaatacatagtatatcacctatatat 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 634 cgctttgctaacatctctaaacagatctatccatgaatacatagtatatcacctatatat 575
Query: 185 ttggcaaagattcattccttgtgggtattcaagcttatattcattgtggtactccttcgc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 574 ttggcaaagattcattccttgtgggtattcaagcttatattcattgtggtactccttcgc 515
Query: 245 tctttacttttccagtcagtccgtatttacggttggccgggaactgtctctgccacccac 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 tctttacttttccagtcagtccgtatttacggttggccgggaactgtctctgccacccac 455
Query: 305 agtctttgatcacagatgtgcaccattgcacacagcccagtcttctcatgctgagggtaa 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 agtctttgatcacagatgtgcaccattgcacacagcccagtcttctcatgctgagggtaa 395
Query: 365 atttcgcagtcccgtttcctgaatattatttgttttgcttgtcgatgttatttgtttgtt 424
|||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 394 atttcgcagtcccgttacctgaatattatttgttttgcttgtcggtgttatttgtttgtt 335
Query: 425 ctgctcttagttttagtgagttaggcatgagattcccttctagctctgttctgttgaata 484
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 ttgctcttagttttagtgagttaggcatgagattcccttctagctctgttctgttgaata 275
Query: 485 gtcttgcgtaaacaggaattaaaaatgtttatgtcccatctccatttgcctagggaatag 544
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 gtcttgcataaacaggaattaaaaatgtttatgtcccatctccatttgcctagggaatag 215
Query: 545 aaaggtctct------------tgtaagtttaccatcttacatctgcaaagcagtttctc 592
|||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 214 aaaggtctctggtaggaaactttgtaagtttaccatcttacatctgcaaagcagtttctc 155
Query: 593 tgattttcttacacatgctaggcaagtaagtactctaccactgagctccatccttggccc 652
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 154 tgattttcttacacatgctaggcaagtaagtactctaccactgagctccatccttggccc 95
Query: 653 tgccaggaacttggttaatggtaggtctgtttggttgcagggtgtctgttgtattgatga 712
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 94 tgccaggaacttggttaatggtaggtctgtttggttgcagggtgtctgttgtattgatga 35
Query: 713 a 713
|
Sbjct: 34 a 34
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 713
Length of database: 1113
Length adjustment: 10
Effective length of query: 703
Effective length of database: 1103
Effective search space: 775409
Effective search space used: 775409
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)
| Query= MSMg01no523_o20.g1 MSMg01no523_o20.g1 CHROMAT_FILE:
MSMg01no523_o20.g1 PHD_FILE: MSMg01no523_o20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:58:00 2005
(694 letters)
>mm_chr1_130157159_130158252
Length = 1094
Score = 1311 bits (678), Expect = 0.0
Identities = 690/694 (99%)
Strand = Plus / Plus
Query: 1 ttaattgtgctttgaataatagaatctatcttggttttttgtttttaagcagactaacaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttaattgtgctttgaataatagaatctatcttggttttttgtttttaagcagactaacaa 260
Query: 61 aaaaacttgaagaaaggagagaagagaagaggaaggaagaagcacaggtaggactcactt 120
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 261 aaaaacttgaagaaaggagagaagagaagcggaaggaagaagcacaggtaggactcactt 320
Query: 121 agcagtgtttcactctctgcttcttgaggctatatttgatttcttgtccaatttagcaga 180
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agcagtgtttcacgctctgcttcttgaggctatatttgatttcttgtccaatttagcaga 380
Query: 181 cctaggtcgatatccttagagctcagtgctatattgtggtaaaggaaattatcacttcaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cctaggtcgatatccttagagctcagtgctatattgtggtaaaggaaattatcacttcaa 440
Query: 241 tgtgtccgattatactgtttacattttaggattttggctattgtttgtgtgtgtttgaga 300
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgtgtccgattatactgtttgcattttaggattttggctattgtttgtgtgtgtttgaga 500
Query: 301 caatatctttctgtgcagtccatgctggcctggaaatcttagggctgcaatgaggtacca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 caatatctttctgtgcagtccatgctggcctggaaatcttagggctgcaatgaggtacca 560
Query: 361 tgcccagctgtttctttactttttcttctttctttcttttttatttttaaagatttattt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tgcccagctgtttctttactttttcttctttctttcttttttatttttaaagatttattt 620
Query: 421 atttatttcatgtatgtgagtacactctagctgtcttcagacacaccagaagaagacatc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 atttatttcatgtatgtgagtacactctagctgtcttcagacacaccagaagaagacatc 680
Query: 481 agatcccattacagatggttgtgagccaccatgtggttgctgggaattgaactcaggact 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 agatcccattacagatggttgtgagccaccatgtggttgctgggaattgaactcaggact 740
Query: 541 ttggagagcagtgagtgctcttaactgctgagccatctttccaaccctacctattttctt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 ttggagagcagtgagtgctcttaactgctgagccatctttccaaccctacctattttctt 800
Query: 601 tcttaataaattactagggataattgaataatctttttcctctgtgcagcgagtctttca 660
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 801 tcttaataaattactagggataattgaataatctttttcctctgtgcagtgagtctttca 860
Query: 661 tactaaatatctaaaggaagttgatctaaaattg 694
||||||||||||||||||||||||||||||||||
Sbjct: 861 tactaaatatctaaaggaagttgatctaaaattg 894
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 37
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 694
Length of database: 1094
Length adjustment: 10
Effective length of query: 684
Effective length of database: 1084
Effective search space: 741456
Effective search space used: 741456
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
