XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCATCG
TTAAAATCTCTGCACATCCTTTCTTGGTTCGTGTGTACAGGGGCAGGCTT
ACTGGCACCACCTCCATCCATCCCTGGAATTACAGCACTGGCTTTTTATG
AATGTGATGGGGATCCAACTCGGGTCCTCAGATAAGCATCACAAACATGT
CACCCACCACGCCCTTTCCCCATCAGCAACTTGTTTTGACCCCTTTTCCC
TCTCCTCTCCCTCCTCACTCTCCTTTACCCGGGTTAAAGATGGGTAACGC
CATGACTGGCACCTCTTCAGTTTGGCAGCTCTGTTACCCTAAACTTGAAG
TAGATGTAGCAGCTATGGGGAGGGCTCTCTCAGCCAGTTACTTACAAAAG
GATGGCATATAGGTTCTCCAGAGACATCACCAGCAGCTGCAAACAATATC
AATGTTCAAAGTATGGGTGAAGGGTGTTGCTTATAGGTTCTGTGCCAGCA
GGTGGGAAGCCTAAGACAGTGACATCCCTTAGGGTGTCTCTTCATCTGTC
CCTGGCTGTTTGGCTGGGGAGAATGGGGGGACTGTATAGATCCTGTCCAC
AGGTTCTCATTATATCCCTGTAATAGTCTGCAAGAGTCAGTGATAATCAG
CTTTTTATTTTCCCCAGAGGAAGAAACTGGGGCCAAAGAACTAAAAGCAA
CTTGCGGAAGTTTCTTCAGCTCAGCTGTGGGGCTTACGCTGACCCCGAAA
CCAGCACCCTTCCAN

TGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXAATAAAAAATGATGACATAGCATACCCAAACTTAT
GGGACACAATGAAAGCAGTGCTAAAAGGAAAATTCAGAGCACTAAGTGGC
CTCATAAAGAAATTGGAGAGATTCTACACTAACAACTTAAATGAAATGGC
CAAGATTGGGGAGAGAGAACTCCTAGAGTCTACCTCCAGTAGAAAGACGG
AGTATCAAGTAGAGGGATGGGTTGCCATTCCACAGTAAAAAGCTTGAACC
CAGAATTGTTCCTGTCTAAAAGAACTGTAGGGACAAAAAATGGAGAAGAG
ACTGGGGGAGGCTGGAAGAAGCTGAGGAGGATAGGCACCATAGGAAGACA
AGCAATCTCAACTAACCCAGACCTCTGAGATCTCTCAGACATTAAGCTGC
CAACCAGGCAGCATATGGGAGGTGGTCTGAGGCCCCTGACACATATACAG
CATAGGATTACCTGGTCTGGCCTCAGTGGGAGAAGATGTGCCTAACTCCC
TGGAGACCTGAGGACCAGGGAGTAGGGAGGCCTTTGGGGTTGGAGGCATC
CTCTTGGAGACAGAGGAGGAGGAATGGAATGAGGAGGAATGGGAGAAAGG
ACCAGGAGGTGGGCAATGACAGAATTGTAAAAAGAATAAAAATAACTTTA
AAAAAAAAAAGAAAGAAAAGAAATAAGTAAACAAGTCAAAGGCATTCTCC
TACTATTAACTATCATAACAGG

Query= MSMg01no524_c07.b1 MSMg01no524_c07.b1 CHROMAT_FILE:
MSMg01no524_c07.b1 PHD_FILE: MSMg01no524_c07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:58:19 2005
         (632 letters)



>mm_chr1_121765484_121766515
          Length = 1032

 Score = 1199 bits (620), Expect = 0.0
 Identities = 626/628 (99%)
 Strand = Plus / Minus

                                                                        
Query: 5    gaattcatcgttaaaatctctgcacatcctttcttggttcgtgtgtacaggggcaggctt 64
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1015 gaattcatcgttaaaatctctgcacatcctttcttggttcgtgtgtacaggggcaggctt 956

                                                                        
Query: 65   actggcaccacctccatccatccctggaattacagcactggctttttatgaatgtgatgg 124
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 955  actggcaccacctccatccatccctggaattacagcactggctttttatgaatgtgatgg 896

                                                                        
Query: 125  ggatccaactcgggtcctcagataagcatcacaaacatgtcacccaccacgccctttccc 184
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 895  ggatccaactcgggtcctcagataagcatcacaaacatgtcacccaccacgccctttccc 836

                                                                        
Query: 185  catcagcaacttgttttgaccccttttccctctcctctccctcctcactctcctttaccc 244
            || ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 835  caccagcaacttgttttgaccccttttccctctcctctccctcctcactctcctttcccc 776

                                                                        
Query: 245  gggttaaagatgggtaacgccatgactggcacctcttcagtttggcagctctgttaccct 304
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 775  gggttaaagatgggtaacgccatgactggcacctcttcagtttggcagctctgttaccct 716

                                                                        
Query: 305  aaacttgaagtagatgtagcagctatggggagggctctctcagccagttacttacaaaag 364
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 715  aaacttgaagtagatgtagcagctatggggagggctctctcagccagttacttacaaaag 656

                                                                        
Query: 365  gatggcatataggttctccagagacatcaccagcagctgcaaacaatatcaatgttcaaa 424
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 655  gatggcatataggttctccagagacatcaccagcagctgcaaacaatatcaatgttcaaa 596

                                                                        
Query: 425  gtatgggtgaagggtgttgcttataggttctgtgccagcaggtgggaagcctaagacagt 484
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 595  gtatgggtgaagggtgttgcttataggttctgtgccagcaggtgggaagcctaagacagt 536

                                                                        
Query: 485  gacatcccttagggtgtctcttcatctgtccctggctgtttggctggggagaatgggggg 544
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535  gacatcccttagggtgtctcttcatctgtccctggctgtttggctggggagaatgggggg 476

                                                                        
Query: 545  actgtatagatcctgtccacaggttctcattatatccctgtaatagtctgcaagagtcag 604
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475  actgtatagatcctgtccacaggttctcattatatccctgtaatagtctgcaagagtcag 416

                                        
Query: 605  tgataatcagctttttattttccccaga 632
            ||||||||||||||||||||||||||||
Sbjct: 415  tgataatcagctttttattttccccaga 388


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 632
Length of database: 1032
Length adjustment: 10
Effective length of query: 622
Effective length of database: 1022
Effective search space:   635684
Effective search space used:   635684
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)