Query= MSMg01no524_l07.b1 MSMg01no524_l07.b1 CHROMAT_FILE:
MSMg01no524_l07.b1 PHD_FILE: MSMg01no524_l07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:59:03 2005
(591 letters)
>mm_chr1_137930837_137931827
Length = 991
Score = 1091 bits (564), Expect = 0.0
Identities = 582/588 (98%)
Strand = Plus / Plus
Query: 4 ggaattcatccctcctgtcttcaccattcctcccagctccacatcttaaggatgcttatg 63
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 204 ggaattcatccctcctgtcttcaccattcctcccagctccacatcttaaggatgcttacg 263
Query: 64 ggagacgaagctgtgtcatcaagagctcagtgggtgcgaggaaagtatgatccagtgctc 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 264 ggagacgaagctgtgtcatcaagagctcagtgggtgcgaggaaagtatgatccagcgctc 323
Query: 124 agccttcgctctaggatgctgtggtccccattcccagttcctccagtgccagtactttag 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 agccttcgctctaggatgctgtggtccccattcccagttcctccagtgccagtactttag 383
Query: 184 cttggcctggccccagtctcaggaactgttgtggtgcccctgagcccacagtcatctcca 243
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 cttggcctagccccagtctcaggaactgttgtggtgcccctgagcccacagtcatctcca 443
Query: 244 gagtccacctggaagcctgttcccctctcctcggctcctggtccaccagtgcatggcagt 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 gagtccacctggaagcctgttcccctctcctcggctcctggtccaccagtgcatggcagt 503
Query: 304 gcccatgcatgccggcatattcagcagctgtcaccttactcccatcccaggaggccgtaa 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 gcccatgcatgccggcatattcagcagctgtcaccttactcccatcccaggaggccgtaa 563
Query: 364 ggcctcccacctctcccctgtgactgcagctgctgagccataaagttggaccatatgaca 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 ggcctcccacctctcccctgtgactgcagctgctgagccataaagttggaccatatgaca 623
Query: 424 caaggccaatggggaccggagtaccatggctcctgtccttggatggcctcttgtccctga 483
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 624 caaggccaatggggaccggagtaccatggctcctgtccttggatggtctcttgtccctga 683
Query: 484 atttcattgtatcatgcatggagagaaatgtttgtctttctgttgtctatacatcgaaga 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 684 atttcattgtatcatgcatggagagaaatgtttgtctttctgttgtctatacatcaaaga 743
Query: 544 agccattaaattgttttatttctcaaaagttgcagatctcaagggaga 591
|||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 744 agccattaaattgttttatttctcaagagttgcagatctcaagggaga 791
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 591
Length of database: 991
Length adjustment: 10
Effective length of query: 581
Effective length of database: 981
Effective search space: 569961
Effective search space used: 569961
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no524_l07.g1 MSMg01no524_l07.g1 CHROMAT_FILE:
MSMg01no524_l07.g1 PHD_FILE: MSMg01no524_l07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:59:03 2005
(308 letters)
>mm_chr1_138054169_138054876
Length = 708
Score = 584 bits (302), Expect = e-171
Identities = 308/310 (99%), Gaps = 2/310 (0%)
Strand = Plus / Minus
Query: 1 ctgcccacaaggacaattcttttggtcttatctcctatcatgaacatgaatctgaactag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 ctgcccacaaggacaattcttttggtcttatctcctatcatgaacatgaatctgaactag 258
Query: 61 aggcccagtcctcctgtttcttccaggcctggagctccatgtgtttgatctttgttggtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 aggcccagtcctcctgtttcttccaggcctggagctccatgtgtttgatctttgttggtg 198
Query: 121 actttgggcaaattcttgcccttctctgaactcaaattatcatcttggacatgtaggggt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 197 actttgggcaaattcttgcccttctctgaactcaaattatcatcttggacatgtaggggt 138
Query: 181 tggggcagaagccaacagtggctctgcctttctgatgggctgtactctgctccaagtgtg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 137 tggggcagaagccaacagtggctctgcctttctgatgggctgtactctgctccaagtgtg 78
Query: 241 gctcttgtcacttggaacagtaggaactgga-ggggggttgc-ggggggggggtaactgg 298
||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||
Sbjct: 77 gctcttgtcacttggaacagtaggaactggagggggggttgcgggggggggggtaactgg 18
Query: 299 tagggagagg 308
||||||||||
Sbjct: 17 tagggagagg 8
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 308
Length of database: 708
Length adjustment: 9
Effective length of query: 299
Effective length of database: 699
Effective search space: 209001
Effective search space used: 209001
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
