MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-526C07
Chromosome	1 (Build37)
Map Location	75,991,613 - 75,992,053
singlet/doublet	singlet
Overlap gene	none
Upstream gene	Ihh, Nhej1, Slc23a3, 1810031K17Rik, BC038286, Zfand2b, Abcb6, Atg9a, D1Ertd161e, Stk16, Tuba4a, A630095N17Rik, Dnajb10, Ptprn, Resp18, Dnpep, Des, Speg, Gmppa, Accn4, D1Bwg1363e, A230078I05Rik, AW822216, Inha, Stk11ip, Slc4a3, LOC100039069, LOC383531
Downstream gene	none
Link	Open Mouse BAC browser

Click to get alignment info.

name	Ihh (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16147 MGI:96533
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Nhej1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:75570 MGI:1922820
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Slc23a3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:22626 MGI:104516
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	1810031K17Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69171 MGI:1916421
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	BC038286 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:227298 MGI:2388278
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Zfand2b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68818 MGI:1916068
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Abcb6 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74104 MGI:1921354
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Atg9a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:245860 MGI:2138446
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	D1Ertd161e (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:52231 MGI:1098746
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Stk16 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20872 MGI:1313271
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tuba4a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:22145 MGI:1095410
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	A630095N17Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:381272 MGI:2686470
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA

name	Dnajb10 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56812 MGI:1928739
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Ptprn (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19275 MGI:102765
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Resp18 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19711 MGI:1098222
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Dnpep (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13437 MGI:1278328
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Des (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13346 MGI:94885
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Speg (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11790 MGI:109282
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gmppa (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69080 MGI:1916330
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Accn4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:241118 MGI:2652846
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	D1Bwg1363e (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74241 MGI:106576
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	A230078I05Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:319998 MGI:2443133
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	AW822216 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:98733 MGI:2138628
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Inha (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16322 MGI:96569
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Stk11ip (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71728 MGI:1918978
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Slc4a3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20536 MGI:109350
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039069 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039069
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	LOC383531 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:383531
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 ESTs, 11 Proteins pseudo : _no_value

name	Ihh (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31981670 GeneID:16147 MGI:96533
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Indian hedgehog transcript_id : NM_010544.2

name	Nhej1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124244080 GeneID:75570 MGI:1922820
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : nonhomologous end-joining factor 1 transcript_id : NM_029342.3

name	Slc23a3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124244078 GeneID:22626 MGI:104516
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 23 (nucleobase transporters), member 3 transcript_id : NM_194333.3

name	1810031K17Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142345619 GeneID:69171 MGI:1916421
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 1810031K17 gene transcript_id : NM_026977.2

name	BC038286 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124248547 GeneID:227298 MGI:2388278
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cDNA sequence BC038286 transcript_id : NM_170755.2

name	Zfand2b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142370159 GeneID:68818 MGI:1916068
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zinc finger, AN1 type domain 2B transcript_id : NM_026846.2

name	Abcb6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31980774 GeneID:74104 MGI:1921354
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ATP-binding cassette, sub-family B (MDR/TAP), member 6 transcript_id : NM_023732.2

name	Atg9a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:86990445 GeneID:245860 MGI:2138446
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : autophagy-related 9A (yeast) transcript_id : NM_001003917.2

name	D1Ertd161e (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:110556648 GeneID:52231 MGI:1098746
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : DNA segment, Chr 1, ERATO Doi 161, expressed transcript_id : NM_026187.4

name	Stk16 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142387156 GeneID:20872 MGI:1313271
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : serine/threonine kinase 16 transcript_id : NM_011494.3

name	Tuba4a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142387233 GeneID:22145 MGI:1095410
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : tubulin, alpha 4A transcript_id : NM_009447.3

name	A630095N17Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149234112 GeneID:381272 MGI:2686470
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA A630095N17 gene transcript_id : XM_001472088.1

name	Dnajb10 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142388493 GeneID:56812 MGI:1928739
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : DnaJ (Hsp40) homolog, subfamily B, member 10 transcript_id : NM_178055.3

name	Dnajb10 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:9937995 GeneID:56812 MGI:1928739
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : DnaJ (Hsp40) homolog, subfamily B, member 10 transcript_id : NM_020266.1

name	Ptprn (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:116089338 GeneID:19275 MGI:102765
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : protein tyrosine phosphatase, receptor type, N transcript_id : NM_008985.2

name	Resp18 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6677716 GeneID:19711 MGI:1098222
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : regulated endocrine-specific protein 18 transcript_id : NM_009049.1

name	Dnpep (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142378273 GeneID:13437 MGI:1278328
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : aspartyl aminopeptidase transcript_id : NM_016878.3

name	Des (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:33563249 GeneID:13346 MGI:94885
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : desmin transcript_id : NM_010043.1

name	Speg (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:110225354 GeneID:11790 MGI:109282
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : SPEG complex locus transcript_id : NM_007463.3

name	Gmppa (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130918 GeneID:69080 MGI:1916330
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : GDP-mannose pyrophosphorylase A transcript_id : NM_133708.2

name	Accn4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130710 GeneID:241118 MGI:2652846
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : amiloride-sensitive cation channel 4, pituitary transcript_id : NM_183022.2

name	D1Bwg1363e (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:48526513 GeneID:74241 MGI:106576
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : DNA segment, Chr 1, Brigham & Women's Genetics 1363 expressed transcript_id : NM_001001566.1

name	D1Bwg1363e (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:48525358 GeneID:74241 MGI:106576
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : DNA segment, Chr 1, Brigham & Women's Genetics 1363 expressed transcript_id : NM_001001565.1

name	A230078I05Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142386564 GeneID:319998 MGI:2443133
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA A230078I05 gene transcript_id : NM_177056.3

name	AW822216 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802473 GeneID:98733 MGI:2138628
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : expressed sequence AW822216 transcript_id : NM_178884.3

name	Inha (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130058 GeneID:16322 MGI:96569
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : inhibin alpha transcript_id : NM_010564.4

name	Stk11ip (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:40254180 GeneID:71728 MGI:1918978
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : serine/threonine kinase 11 interacting protein transcript_id : NM_027886.2

name	Slc4a3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142378544 GeneID:20536 MGI:109350
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 4 (anion exchanger), member 3 transcript_id : NM_009208.2

name	Ihh (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:14149643 CCDS:CCDS15061.1 GeneID:16147 MGI:96533
definition	GO_component : GO:0005615 - extracellular space [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0016787 - hydrolase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007154 - cell communication [Evidence IEA]; GO:0030154 - cell differentiation [Evidence IDA]; GO:0048469 - cell maturation [Evidence IMP]; GO:0007267 - cell-cell signaling [Evidence IEA]; GO:0007275 - development [Evidence IEA]; GO:0016539 - intein-mediated protein splicing [Evidence IEA]; GO:0045596 - negative regulation of cell differentiation [Evidence IMP]; GO:0001649 - osteoblast differentiation [Evidence IMP]; GO:0007389 - pattern specification [Evidence IEA]; GO:0001569 - patterning of blood vessels [Evidence IMP]; GO:0008284 - positive regulation of cell proliferation [Evidence IMP]; GO:0006508 - proteolysis [Evidence IEA]; GO:0001501 - skeletal development [Evidence IMP] codon_start : 1 product : Indian hedgehog protein_id : NP_034674.1

name	Nhej1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124244081 GeneID:75570 MGI:1922820
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_process : GO:0006281 - DNA repair [Evidence IEA]; GO:0006974 - response to DNA damage stimulus [Evidence IEA] codon_start : 1 exception : unclassified translation discrepancy product : nonhomologous end-joining factor 1 protein_id : NP_083618.2

name	Slc23a3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124244079 CCDS:CCDS15062.1 GeneID:22626 MGI:104516
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0003674 - molecular_function [Evidence ND]; GO:0005215 - transporter activity [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : yolk sac permease-like molecule 1 product : solute carrier family 23 (nucleobase transporters), member 3 protein_id : NP_919314.2

name	1810031K17Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:29789185 CCDS:CCDS15063.1 GeneID:69171 MGI:1916421
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] codon_start : 1 product : hypothetical protein LOC69171 protein_id : NP_081253.1

name	BC038286 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124248548 GeneID:227298 MGI:2388278
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] codon_start : 1 product : hypothetical protein LOC227298 protein_id : NP_739561.2

name	Zfand2b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21312112 CCDS:CCDS15064.1 GeneID:68818 MGI:1916068
definition	GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 exception : mismatches in translation product : zinc finger, AN1 type domain 2B protein_id : NP_081122.1

name	Abcb6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:17647117 CCDS:CCDS15065.1 GeneID:74104 MGI:1921354
definition	GO_component : GO:0005740 - mitochondrial envelope [Evidence ISS] GO_function : GO:0005524 - ATP binding [Evidence IEA] [Evidence ISS]; GO:0016887 - ATPase activity [Evidence IEA]; GO:0042626 - ATPase activity, coupled to transmembrane movement of substances [Evidence IEA] GO_process : GO:0006810 - transport [Evidence ISS] [Evidence IEA] codon_start : 1 product : ATP-binding cassette, sub-family B (MDR/TAP), member 6 protein_id : NP_076221.1

name	Atg9a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:86990446 GeneID:245860 MGI:2138446
definition	GO_component : GO:0005776 - autophagic vacuole [Evidence IDA]; GO:0005737 - cytoplasm [Evidence IDA]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004129 - cytochrome-c oxidase activity [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0000045 - autophagic vacuole formation [Evidence ISS]; GO:0006914 - autophagy [Evidence IEA]; GO:0006118 - electron transport [Evidence IEA]; GO:0015031 - protein transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA]; GO:0006512 - ubiquitin cycle [Evidence IEA] codon_start : 1 note : APG9 autophagy 9-like 1; autophagy protein 9 product : autophagy-related 9-like 1 protein_id : NP_001003917.2

name	D1Ertd161e (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110556649 GeneID:52231 MGI:1098746
definition	GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 exception : unclassified translation discrepancy product : ankyrin repeat and zinc finger domain containing protein protein_id : NP_080463.3

name	Stk16 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31543784 CCDS:CCDS15067.1 GeneID:20872 MGI:1313271
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004672 - protein kinase activity [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006468 - protein amino acid phosphorylation [Evidence IEA] codon_start : 1 exception : mismatches in translation note : kinase related to cerevisiae and thaliana; Embryo-Derived Protein Kinase product : serine/threonine kinase 16 protein_id : NP_035624.2

name	Tuba4a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6678467 GeneID:22145 MGI:1095410
definition	GO_component : GO:0005874 - microtubule [Evidence IEA]; GO:0043234 - protein complex [Evidence IEA] GO_function : GO:0003924 - GTPase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005200 - structural constituent of cytoskeleton [Evidence IEA] GO_process : GO:0007017 - microtubule-based process [Evidence IEA]; GO:0051258 - protein polymerization [Evidence IEA] codon_start : 1 product : tubulin, alpha 4 protein_id : NP_033473.1

name	A630095N17Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149234113 GeneID:381272 MGI:2686470
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001472138.1

name	Dnajb10 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30017349 GeneID:56812 MGI:1928739
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0031072 - heat shock protein binding [Evidence IEA] GO_process : GO:0006457 - protein folding [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2; heat shock protein, DNAJ-like 1 product : DnaJ (Hsp40) homolog, subfamily B, member 10 isoform 2 protein_id : NP_835156.1

name	Dnajb10 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:9937996 CCDS:CCDS15068.1 GeneID:56812 MGI:1928739
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0031072 - heat shock protein binding [Evidence IEA] GO_process : GO:0006457 - protein folding [Evidence IEA] codon_start : 1 exception : mismatches in translation note : isoform 1 is encoded by transcript variant 1; heat shock protein, DNAJ-like 1 product : DnaJ (Hsp40) homolog, subfamily B, member 10 isoform 1 protein_id : NP_064662.1

name	Ptprn (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:116089339 GeneID:19275 MGI:102765
definition	GO_component : GO:0016020 - membrane [Evidence IEA]; GO:0005624 - membrane fraction [Evidence TAS]; GO:0005886 - plasma membrane [Evidence TAS] GO_function : GO:0016787 - hydrolase activity [Evidence IEA]; GO:0004721 - phosphoprotein phosphatase activity [Evidence IEA]; GO:0004725 - protein tyrosine phosphatase activity [Evidence TAS]; GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0006470 - protein amino acid dephosphorylation [Evidence IEA]; GO:0007185 - transmembrane receptor protein tyrosine phosphatase signaling pathway [Evidence TAS] codon_start : 1 note : protein tyrosine phosphatase, receptor-type, N product : protein tyrosine phosphatase, receptor type, N protein_id : NP_033011.2

name	Resp18 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6677717 CCDS:CCDS15069.1 GeneID:19711 MGI:1098222
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IDA] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 product : regulated endocrine-specific protein 18 protein_id : NP_033075.1

name	Dnpep (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31560449 CCDS:CCDS15070.1 GeneID:13437 MGI:1278328
definition	GO_component : GO:0005773 - vacuole [Evidence IEA] GO_function : GO:0004177 - aminopeptidase activity [Evidence IEA]; GO:0004250 - aminopeptidase I activity [Evidence IEA]; GO:0042576 - aspartyl aminopeptidase activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0008237 - metallopeptidase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006508 - proteolysis [Evidence IEA] codon_start : 1 exception : mismatches in translation product : aspartyl aminopeptidase protein_id : NP_058574.2

name	Des (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33563250 CCDS:CCDS15071.1 GeneID:13346 MGI:94885
definition	GO_component : GO:0043292 - contractile fiber [Evidence IDA]; GO:0005856 - cytoskeleton [Evidence IDA]; GO:0005626 - insoluble fraction [Evidence IDA]; GO:0005882 - intermediate filament [Evidence IEA]; GO:0042383 - sarcolemma [Evidence IDA]; GO:0045202 - synapse [Evidence IDA]; GO:0030018 - Z disc [Evidence IDA] GO_function : GO:0005515 - protein binding [Evidence IPI]; GO:0005200 - structural constituent of cytoskeleton [Evidence TAS]; GO:0005198 - structural molecule activity [Evidence IEA] GO_process : GO:0007517 - muscle development [Evidence TAS] codon_start : 1 product : desmin protein_id : NP_034173.1

name	Speg (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110225355 GeneID:11790 MGI:109282
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0030154 - cell differentiation [Evidence IEA]; GO:0006468 - protein amino acid phosphorylation [Evidence IEA] codon_start : 1 exception : mismatches in translation product : aortic preferentially expressed gene 1 protein_id : NP_031489.3

name	Gmppa (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:19526884 CCDS:CCDS15072.1 GeneID:69080 MGI:1916330
definition	GO_function : GO:0008415 - acyltransferase activity [Evidence IEA] codon_start : 1 product : GDP-mannose pyrophosphorylase A protein_id : NP_598469.1

name	Accn4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33942102 CCDS:CCDS15073.1 GeneID:241118 MGI:2652846
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005216 - ion channel activity [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND]; GO:0005272 - sodium channel activity [Evidence IEA]; GO:0031402 - sodium ion binding [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0006811 - ion transport [Evidence IEA]; GO:0006814 - sodium ion transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : acid-sensing ion channel; acid-sensing ion channel 4 product : amiloride-sensitive cation channel 4, pituitary protein_id : NP_898843.1

name	D1Bwg1363e (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:48526514 CCDS:CCDS15074.1 GeneID:74241 MGI:106576
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0047238 - glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0050510 - N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] codon_start : 1 note : isoform a is encoded by transcript variant 1 product : chondroitin polymerizing factor isoform a protein_id : NP_001001566.1

name	D1Bwg1363e (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:48525359 CCDS:CCDS15075.1 GeneID:74241 MGI:106576
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0047238 - glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0050510 - N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] codon_start : 1 note : isoform b is encoded by transcript variant 2 product : chondroitin polymerizing factor isoform b protein_id : NP_001001565.1

name	A230078I05Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28892951 CCDS:CCDS15076.1 GeneID:319998 MGI:2443133
definition	codon_start : 1 product : hypothetical protein LOC319998 protein_id : NP_796030.1

name	AW822216 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30725726 CCDS:CCDS15077.1 GeneID:98733 MGI:2138628
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence IEA] GO_process : GO:0007155 - cell adhesion [Evidence IEA] codon_start : 1 exception : mismatches in translation product : hypothetical protein LOC98733 protein_id : NP_849215.1

name	Inha (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:40254367 CCDS:CCDS15078.1 GeneID:16322 MGI:96569
definition	GO_component : GO:0005576 - extracellular region [Evidence ISS] [Evidence IEA] GO_function : GO:0017106 - activin inhibitor activity [Evidence ISS]; GO:0005125 - cytokine activity [Evidence ISS]; GO:0008083 - growth factor activity [Evidence ISS] [Evidence IEA]; GO:0005179 - hormone activity [Evidence ISS] [Evidence IEA]; GO:0005515 - protein binding [Evidence ISS] GO_process : GO:0007050 - cell cycle arrest [Evidence ISS]; GO:0030154 - cell differentiation [Evidence ISS]; GO:0007166 - cell surface receptor linked signal transduction [Evidence ISS]; GO:0007267 - cell-cell signaling [Evidence ISS]; GO:0030218 - erythrocyte differentiation [Evidence ISS]; GO:0042541 - hemoglobin biosynthesis [Evidence ISS]; GO:0006917 - induction of apoptosis [Evidence ISS]; GO:0045578 - negative regulation of B cell differentiation [Evidence ISS]; GO:0046882 - negative regulation of follicle-stimulating hormone secretion [Evidence ISS]; GO:0045077 - negative regulation of interferon-gamma biosynthesis [Evidence ISS]; GO:0045650 - negative regulation of macrophage differentiation [Evidence ISS]; GO:0042326 - negative regulation of phosphorylation [Evidence ISS]; GO:0007399 - nervous system development [Evidence ISS]; GO:0001541 - ovarian follicle development [Evidence ISS]; GO:0046881 - positive regulation of follicle-stimulating hormone secretion [Evidence ISS] codon_start : 1 product : inhibin alpha protein_id : NP_034694.3

name	Stk11ip (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:40254181 CCDS:CCDS15079.1 GeneID:71728 MGI:1918978
definition	GO_function : GO:0016301 - kinase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] codon_start : 1 exception : mismatches in translation product : serine/threonine kinase 11 interacting protein protein_id : NP_082162.2

name	Slc4a3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6678023 CCDS:CCDS15080.1 GeneID:20536 MGI:109350
definition	GO_component : GO:0005887 - integral to plasma membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0015380 - anion exchanger activity [Evidence IEA]; GO:0015297 - antiporter activity [Evidence IEA]; GO:0005386 - carrier activity [Evidence IEA]; GO:0005452 - inorganic anion exchanger activity [Evidence IEA] GO_process : GO:0006820 - anion transport [Evidence IEA]; GO:0006811 - ion transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 exception : mismatches in translation note : anion exchanger 3 cardiac isoform product : solute carrier family 4 (anion exchanger), member 3 protein_id : NP_033234.1

name	LOC100039069 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039069
definition	number : 1 pseudo : _no_value

name	LOC100039069 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039069
definition	number : 2 pseudo : _no_value

name	LOC100039069 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039069
definition	number : 3 pseudo : _no_value

name	(CDS detail)
type	STS
link
xref	UniSTS:207175
definition	standard_name : AI323361

name	(CDS detail)
type	STS
link
xref	UniSTS:158813
definition	standard_name : U85610

name	(CDS detail)
type	STS
link
xref	UniSTS:143529
definition	standard_name : Ihh

name	(CDS detail)
type	STS
link
xref	UniSTS:143530
definition	standard_name : Ihh

name	(CDS detail)
type	STS
link
xref	UniSTS:128928
definition	standard_name : D1Mit7

name	(CDS detail)
type	STS
link
xref	UniSTS:234154
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:128596
definition	standard_name : D1Mit252

name	(CDS detail)
type	STS
link
xref	UniSTS:128597
definition	standard_name : D1Mit252.1

name	(CDS detail)
type	STS
link
xref	UniSTS:128574
definition	standard_name : D1Mit23

name	(CDS detail)
type	STS
link
xref	UniSTS:144812
definition	standard_name : Yspl1

name	(CDS detail)
type	STS
link
xref	UniSTS:207173
definition	standard_name : AI874954

name	(CDS detail)
type	STS
link
xref	UniSTS:158814
definition	standard_name : AU043960

name	(CDS detail)
type	STS
link
xref	UniSTS:234151
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:207174
definition	standard_name : RH127040

name	(CDS detail)
type	STS
link
xref	UniSTS:234155
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:210415
definition	standard_name : RH136427

name	(CDS detail)
type	STS
link
xref	UniSTS:141487
definition	standard_name : D10Bir8

name	(CDS detail)
type	STS
link
xref	UniSTS:261345
definition	standard_name : AA955828

name	(CDS detail)
type	STS
link
xref	UniSTS:163032
definition	standard_name : RH126324

name	(CDS detail)
type	STS
link
xref	UniSTS:163253
definition	standard_name : AF089869

name	(CDS detail)
type	STS
link
xref	UniSTS:163252
definition	standard_name : X74438

name	(CDS detail)
type	STS
link
xref	UniSTS:277628
definition	standard_name : PTPRN_v432

name	(CDS detail)
type	STS
link
xref	UniSTS:125834
definition	standard_name : X74438

name	(CDS detail)
type	STS
link
xref	UniSTS:269893
definition	standard_name : MARC_8095-8096:996688286:1

name	(CDS detail)
type	STS
link
xref	UniSTS:186036
definition	standard_name : AI851012

name	(CDS detail)
type	STS
link
xref	UniSTS:142240
definition	standard_name : D1Mcg7

name	(CDS detail)
type	STS
link
xref	UniSTS:162489
definition	standard_name : RH125731

name	(CDS detail)
type	STS
link
xref	UniSTS:128921
definition	standard_name : D1Mit61

name	(CDS detail)
type	STS
link
xref	UniSTS:271986
definition	standard_name : PMC209322P1

name	(CDS detail)
type	STS
link
xref	UniSTS:238157
definition	standard_name : Des

name	(CDS detail)
type	STS
link
xref	UniSTS:186401
definition	standard_name : G67372

name	(CDS detail)
type	STS
link
xref	UniSTS:460346
definition	standard_name : stSG632979

name	(CDS detail)
type	STS
link
xref	UniSTS:221134
definition	standard_name : RH139048

name	(CDS detail)
type	STS
link
xref	UniSTS:185440
definition	standard_name : U57098

name	(CDS detail)
type	STS
link
xref	UniSTS:212009
definition	standard_name : RH128701

name	(CDS detail)
type	STS
link
xref	UniSTS:178414
definition	standard_name : AW125581

name	(CDS detail)
type	STS
link
xref	UniSTS:142231
definition	standard_name : D1Bwg1450e

name	(CDS detail)
type	STS
link
xref	UniSTS:125501
definition	standard_name : N28140

name	(CDS detail)
type	STS
link
xref	UniSTS:161881
definition	standard_name : RH125059

name	(CDS detail)
type	STS
link
xref	UniSTS:377965
definition	standard_name : REN53165

name	(CDS detail)
type	STS
link
xref	UniSTS:377966
definition	standard_name : REN53166

name	(CDS detail)
type	STS
link
xref	UniSTS:377967
definition	standard_name : REN53167

name	(CDS detail)
type	STS
link
xref	UniSTS:460409
definition	standard_name : stSG633055

name	(CDS detail)
type	STS
link
xref	UniSTS:287508
definition	standard_name : ECD06448

name	(CDS detail)
type	STS
link
xref	UniSTS:142230
definition	standard_name : D1Bwg1363e

name	(CDS detail)
type	STS
link
xref	UniSTS:161873
definition	standard_name : RH125051

name	(CDS detail)
type	STS
link
xref	UniSTS:158815
definition	standard_name : AI414328

name	(CDS detail)
type	STS
link
xref	UniSTS:32120
definition	standard_name : RH48039

name	(CDS detail)
type	STS
link
xref	UniSTS:378077
definition	standard_name : REN53277

name	(CDS detail)
type	STS
link
xref	UniSTS:207177
definition	standard_name : AW822216

name	(CDS detail)
type	STS
link
xref	UniSTS:378213
definition	standard_name : REN53413

name	(CDS detail)
type	STS
link
xref	UniSTS:298224
definition	standard_name : ECD17211

name	(CDS detail)
type	STS
link
xref	UniSTS:128466
definition	standard_name : D1Mit131

name	(CDS detail)
type	STS
link
xref	UniSTS:142241
definition	standard_name : D1Mcg8

name	(CDS detail)
type	STS
link
xref	UniSTS:143587
definition	standard_name : Inha

name	(CDS detail)
type	STS
link
xref	UniSTS:178415
definition	standard_name : AW555078

name	(CDS detail)
type	STS
link
xref	UniSTS:207229
definition	standard_name : C87829

name	(CDS detail)
type	STS
link
xref	UniSTS:185441
definition	standard_name : BB131189

name	(CDS detail)
type	STS
link
xref	UniSTS:234150
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:116254
definition	standard_name : D1Mit46

name	(CDS detail)
type	STS
link
xref	UniSTS:125297
definition	standard_name : MHAa70h12.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:302807
definition	standard_name : ECD21815

name	(CDS detail)
type	STS
link
xref	UniSTS:378971
definition	standard_name : REN54171

name	(CDS detail)
type	STS
link
xref	UniSTS:207172
definition	standard_name : C86447

name	(CDS detail)
type	STS
link
xref	UniSTS:128689
definition	standard_name : D1Mit331

name	(CDS detail)
type	STS
link
xref	UniSTS:128637
definition	standard_name : D1Mit284

name	(CDS detail)
type	STS
link
xref	UniSTS:228347
definition	standard_name : D9Rat170

name	(CDS detail)
type	STS
link
xref	UniSTS:128691
definition	standard_name : D1Mit333

name	(CDS detail)
type	STS
link
xref	UniSTS:128851
definition	standard_name : D1Mit484

name	(CDS detail)
type	STS
link
xref	UniSTS:128850
definition	standard_name : D1Mit483.1

name	(CDS detail)
type	STS
link
xref	UniSTS:128849
definition	standard_name : D1Mit437

name	(CDS detail)
type	STS
link
xref	UniSTS:128468
definition	standard_name : D1Mit133

name	(CDS detail)
type	STS
link
xref	UniSTS:128936
definition	standard_name : D1Mit437

name	(CDS detail)
type	STS
link
xref	UniSTS:125238
definition	standard_name : MHAa59g5.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:128501
definition	standard_name : D1Mit162

name	(CDS detail)
type	STS
link
xref	UniSTS:128805
definition	standard_name : D1Mit436

name	LOC383531 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149234114 GeneID:383531
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 ESTs, 11 Proteins product : similar to Rpl7a protein pseudo : _no_value transcript_id : XR_030615.1

clone name	MSMg01-315I18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-325A08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-101C19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-134I18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-191K17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-191L17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-335F18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-150M07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-518N08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-276B03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-098O14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-426P02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-180D10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-406D17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-466G02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-169F03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-064J06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-209I08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-066P12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-410F06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-508D17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-497P05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-539L01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-156F20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-389P03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-105J01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-413F23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-298D15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-390A02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-121F14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-422J14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-465E18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-476I06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-422O07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-393C01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-400P07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-539O12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-455E14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-481I20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-356J24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-439J07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-087E01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-526C07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-278F02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-112H01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-137A06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-171P05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-199H08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-125K10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-384P17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-460B09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-103I19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-515I17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-476H13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-131F12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-267H03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-400N02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-164M15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-512L16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-497F22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-429E05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-548P20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-451I22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-494C10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-432B14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-159I22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-305K14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-231B11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-126M10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-046M10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-123F14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-350O19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-121D07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-309O08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-305B21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-267O08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-264L13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-516C08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-403K18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-406E01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-111J08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-495G17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-205J24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-404F24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-522D21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-417F11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-293D09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-049N05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-215G04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-436M07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-419N21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-114A15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-264E19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-437P21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-050H16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-273G15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-456G06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-118K16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-410P17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-111O18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-020J03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-158I14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-060L16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-177C08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-011O11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-044L19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-251H13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-123G22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-130L23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-252A21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-124J10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-260H23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-143O05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-036F14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-339C12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-019I13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-035M09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-289P08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-300I14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-200B22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-164J08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-034E05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-069F14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-298A19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-181K05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-314F06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-167A08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-241K07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-312P09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-077F12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-242K14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-303P19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-323E16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-198B15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-181G11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-220O08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-197F20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-274N05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-309M22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-296M14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-309J20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-128E08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-033G02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-305K19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-269B04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-032O19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-257O10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-120O14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-337B05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-129D14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-116G02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-283K04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-166F20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-300D24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-181N02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-007O14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-301H09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-120K03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-291A16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-315J06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-345O16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-219I16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-248B13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-093D11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-050L12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-019G12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-267K10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-180D17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-074H09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-177C12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-012K05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-299D14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-275F17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-102F24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-237P18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-278F02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-338M23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-186J24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-148H10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-232C03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-342M15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-081L04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-082J08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-170E21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-332J01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-083G07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-159O18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-007M11
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-526C07.T7 (MSMg01no526_c07.b1)	MSMg01-526C07.TJ (MSMg01no526_c07.g1)
ACC	AG595809	AG595810
length	767	857
length of high quality (start - end)	443 (37 - 479)	49 (66 - 114)
definition	CHROMAT_FILE: MSMg01no526_c07.b1 PHD_FILE: MSMg01no526_c07.b1.phd.1 CHEM: term DYE: big TIME: Wed May 18 21:00:58 2005	CHROMAT_FILE: MSMg01no526_c07.g1 PHD_FILE: MSMg01no526_c07.g1.phd.1 CHEM: term DYE: big TIME: Wed May 18 21:00:58 2005
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTTGC AGCATTCCTGAGGGGGGGGTGGGGGTGGGCGGTTGATGTGCTTAATGCTG TGCACATGTGGCCTTGTCCTCTTGTTTCAGTGAGACAGGGTCTCATTATG TAGTCCAGGCTGGCCTCAACTGGGGACCTTTCTGCCTCTACTTCCTAAAT GCTGGAGTTTTAAGCCTGGTCACCCTTGGCTTCTGGTCATGGCCAAAGCT GCAAATAAAATCCCTATTTTGACTCCAATGATTATAATATGTGGGGGTAA TGGGCTCAAATTAAACCAAATACAGAGGCCAGGAAAACAGCTCAGAGGTA CATTGTTTGCTGGGCACGCTTTAAACCATGGGTCCAATTCCCAGCATCTC CAACTAAATATAGAAACAAGGGCTACTATGCTGTCTGCACTAAGGTCAAC TAAGGTATTATATAATGACTAAACTCCAAATGAACCGAATTAAAAAAAAT TCTAATAAGTTAATTCCAGTCAGTACTAAGATAGCGCTGTTTTTAACTTT TCTATTTTGACAGAATTTCTGAGTTACAGCTAATCTTTTTATAACGGCAC AAAGTTTTTTTCCTGCCCCTCTTCTTTCGAGAGACTCCTATATGGTTAAC AATGGTAACAGTTTTTTTGTTCTCCCTACCTTTCTCTGGACATGGTCTTA AAAAAAACGGTCTCCTAAAACTTAAATGGGCTTCTTGGCCCCTTGTCATG TTTCCTTTCAAGAATAN	GGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXACTTTCAGCAAATACGGGTGGTGGTGGTGGTGGGT GTGTGTGTGTGTGTGAGAGTAAGTACGTATGTTGGTACTTATGAGAATTG TAATCCATAAATGCAACCTAATCCCTTCTTCTCCCGGTTCCATAAATTAT ATACCGTCATTGCACCTATATCTCTGTTCTTTCCACTCTTTTTTCAATGT CCTCCTTCCTATTCACTTCCCCTATATTTCTGTTTTCTCCTTCCCATTCT CGCCCTTAACTTATTAATACATATTATTCTTTCTCTTTTTACCTTTCCCC CTTTTACCACATTCCAACTCATTCCTTTTTACCCCCCCTTACCCCATTAC AACACTTCCTACTCTCCCTTTTTCCATAACTATATTCTCACACACAAATT TCTCCACCACCCATCCAACTCCTTCCTCTTCCCTACTCTCTTAAAATAAC ATAACAAAAACAATACCCCTATTCATATCTAATTTTATTTAAAATTCACT ATCCTTATTTATTAAAATTAATACTCCTTATATCCACCAACCACATTTTT ACAATGTACTATCCACCCTAAGCGTACAAAAACTTACTTACTCTTAACCA ATCTAATTCCTCCCTTTTTATACACTTTTATTTTAAATTCTTCGATACTA CTCTACTTCCACTTATACACATACATCTTCCTCTTTAATAATAAATACCA ATATTCCCCCCTATTCCACATATTTTCCCACTGCACACATATTAGCTATT TCACAAACACACTTATTACTTTTAAATGACACTATACCTTCCTATGTTAT TATGACC
quality values	Open. Hide. 10 10 20 19 22 20 19 19 17 13 13 19 37 37 37 41 29 29 30 30 30 27 27 17 9 9 9 9 9 9 12 13 21 19 17 19 22 59 59 39 39 39 37 37 44 39 44 37 37 37 37 37 15 18 8 8 8 10 12 13 15 18 22 39 47 57 59 59 59 59 59 59 57 54 54 54 54 54 59 57 57 57 57 68 68 68 68 50 54 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 68 59 59 59 59 51 50 50 50 50 50 57 68 68 57 57 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 57 57 59 59 59 59 59 59 57 57 57 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 59 59 59 59 59 59 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 62 62 62 62 62 62 62 62 62 62 62 68 68 68 68 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 68 62 62 62 62 62 52 62 62 62 62 62 62 62 62 68 68 68 68 68 62 62 57 57 57 57 59 68 68 59 59 59 59 59 57 57 57 57 57 57 57 59 57 59 59 59 68 68 68 68 68 68 57 57 52 52 52 57 44 34 19 18 18 17 17 18 28 30 44 43 59 57 57 57 59 59 68 59 57 57 57 57 57 57 68 68 68 68 57 57 57 57 52 59 59 59 59 57 57 57 57 59 59 59 59 57 57 59 44 43 43 50 50 54 54 57 57 57 42 41 38 37 37 37 37 37 46 44 48 47 48 48 44 43 43 42 43 42 39 39 39 47 59 59 59 57 57 57 57 57 57 57 57 57 46 43 37 37 42 59 50 32 32 30 30 30 37 39 43 43 43 32 32 28 23 23 32 30 30 28 28 32 32 24 23 11 11 11 18 17 28 28 30 23 17 13 13 14 26 18 24 15 23 23 32 24 32 32 32 34 34 43 39 39 35 35 28 36 33 33 33 30 33 25 19 19 12 12 12 15 11 16 21 19 22 28 30 33 24 24 26 20 20 18 30 30 28 20 24 23 30 25 28 30 26 26 19 16 15 24 25 29 28 28 30 30 23 24 12 12 12 25 27 28 15 13 13 13 19 13 8 8 8 10 10 8 8 9 9 12 22 30 22 22 22 23 22 10 10 9 9 9 10 21 21 20 15 10 8 8 8 10 15 19 8 8 9 9 10 13 10 10 10 10 10 8 10 15 10 8 8 8 8 10 10 9 12 12 15 22 21 12 9 9 9 9 9 10 21 13 12 10 14 19 19 20 18 11 9 8 8 8 8 10 11 11 18 8 8 8 10 8 8 8 8 8 8 15 10 12 10 15 10 8 8 8 8 9 11 16 11 11 8 8 6 8 8 8 10 8 8 11 10 12 10 8 8 8 10 21 22 18 11 11 16 15 13 7 7 8 8 12 13 8 8 8 15 9 12 16 19 20 16 14 9 7 6 6 6 13 8 11 10 10 10 12 10 15 12 18 20 18 18 11 10 10 10 10 10 10 11 10 10 10 8 8 10 10 12 10 19 10 8 8 8 12 8 10 8 10 10 9 9 10 10 12 16 17 13 7 6 6 8 6 6 8 8 10 14 9 9 9 12 15 15 9 9 9 10 8 8 8 3 0	Open. Hide. 19 19 11 11 11 21 22 26 34 36 36 33 32 37 32 32 37 41 37 33 22 19 11 10 6 6 6 6 11 13 18 28 19 26 21 27 29 41 29 29 30 31 31 31 48 50 50 42 41 34 28 17 17 11 14 14 15 22 18 17 24 20 20 28 33 33 36 36 36 36 37 36 37 43 57 57 57 57 53 48 48 48 57 57 59 59 57 57 57 57 57 57 59 59 57 57 57 59 54 54 54 57 54 54 48 48 43 43 39 32 28 28 15 10 9 9 9 8 8 8 8 8 8 10 11 11 12 12 8 8 12 8 8 8 8 8 8 8 8 8 9 10 10 9 8 8 8 8 8 8 10 12 12 12 10 10 11 12 10 8 8 8 8 8 9 9 9 10 8 8 6 6 8 8 10 8 10 10 8 8 8 8 8 8 8 8 7 8 10 10 10 11 11 11 10 8 8 10 8 8 8 9 8 10 10 8 8 8 6 6 6 6 6 8 8 8 8 8 8 8 8 6 6 8 6 7 7 8 8 12 10 15 15 8 8 6 6 8 8 8 8 12 10 11 11 11 9 6 8 6 6 6 6 8 8 9 9 9 8 8 10 8 8 6 6 8 8 15 10 11 11 11 11 8 10 7 6 10 8 9 9 12 15 12 10 10 10 9 9 8 10 10 10 12 7 7 10 8 8 8 8 8 8 8 8 11 8 8 8 8 10 10 9 9 10 10 10 10 10 8 8 8 9 9 9 10 10 10 11 9 13 12 11 11 11 13 15 10 10 6 6 8 8 9 9 22 11 15 10 10 10 10 9 9 11 11 8 8 8 8 8 8 8 8 9 9 8 8 8 8 8 8 10 10 12 11 11 13 9 10 10 10 10 9 8 8 12 10 8 8 9 9 9 9 9 8 8 8 8 8 8 8 8 6 6 8 8 8 8 8 9 9 10 10 10 10 15 11 11 9 8 11 10 10 9 9 8 8 8 10 10 11 10 8 8 6 6 8 8 8 10 8 6 8 8 8 8 9 11 11 11 11 11 11 10 11 12 10 10 10 10 8 8 8 8 11 11 8 8 8 8 8 8 8 6 6 6 6 8 6 6 8 8 8 8 8 8 6 6 8 8 10 10 11 8 10 6 6 6 6 10 8 8 6 6 8 8 11 8 8 6 6 8 8 8 10 8 8 8 8 8 8 19 19 19 12 8 8 6 6 8 8 8 10 10 8 10 8 8 8 8 8 8 13 10 8 8 6 7 10 10 10 13 11 11 11 11 10 9 7 7 8 8 8 10 12 11 13 10 8 6 6 8 8 8 8 11 11 10 8 8 8 8 12 8 9 10 10 11 11 11 11 8 8 6 6 8 8 12 15 9 9 8 6 8 6 6 6 8 8 8 8 8 6 6 8 8 11 11 11 11 10 10 10 9 9 9 9 10 8 9 8 8 8 8 8 10 10 14 8 8 9 8 10 8 12 12 13 13 11 11 8 8 6 6 8 8 11 8 8 8 8 8 8 9 10 11 17 12 10 8 8 8 8 8 8 9 12 11 15 11 20 13 12 12 12 8 8 8 8 8 8 8 8 8 8 8 6 6 8 8 8 8 6 8 8 8 10 11 11 9 8 8 8 8 8 8 8 8 10 9 8 8 8 9 14 15 15 12 8 8 10 8 8 11 8 10 8 8 10 10 11 11 11 10 6 6 8 8 11 11 10 8 8 6 6 8 8 10 13 11 10 8 8 8 8 8 8 8 10 10 8 8 8 13 16 10 8 8 8 8 7 9 9 10 10 12 11 8 8 9 9 12 8 8 8 8 6 6 8 8 6 6 10 8 8 7 6 8 8 8 8 8 11 8 8 8 8 8 8 8 10 15 13 9 9 9 9 9 8 8 8 8 8 8 10 10 10 9 11 11 11 8 8 6 6 8 8 8 8 8 8 8 8 10 10 10

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no526_c07.b1 MSMg01no526_c07.b1 CHROMAT_FILE:
MSMg01no526_c07.b1 PHD_FILE: MSMg01no526_c07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:00:58 2005
         (443 letters)



>mm_chr1_75991409_75992253
          Length = 845

 Score =  797 bits (412), Expect = 0.0
 Identities = 434/442 (98%), Gaps = 3/442 (0%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattcttgcagcattcctgaggggggggtgggggtgggcggttgatgtgcttaatgct 63
           |||||||||||||||| ||||| |||||||||||||||||| ||||||||||||||| ||
Sbjct: 205 ggaattcttgcagcatccctga-gggggggtgggggtgggcagttgatgtgcttaatact 263

                                                                       
Query: 64  gtgcacatgtggccttgtcctcttgtttcagtgagacagggtctcattatgtagtccagg 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 gtgcacatgtggccttgtcctcttgtttcagtgagacagggtctcattatgtagtccagg 323

                                                                       
Query: 124 ctggcctcaactggggacctttctgcctctacttcctaaatgctggagttttaagcctgg 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ctggcctcaactggggacctttctgcctctacttcctaaatgctggagttttaagcctgg 383

                                                                       
Query: 184 tcacccttggcttctggtcatggccaaagctgcaaataaaatccctattttgactccaat 243
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tcacccttggcttctggtcatagccaaagctgcaaataaaatccctattttgactccaat 443

                                                                       
Query: 244 gattataatatgtgggggtaatgggctcaaattaaaccaaatacagaggccaggaaaaca 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 gattataatatgtgggggtaatgggctcaaattaaaccaaatacagaggccaggaaaaca 503

                                                                       
Query: 304 gctcagaggtacattgtttgctgggcacgctttaaaccatgggtccaattcccagcatct 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 gctcagaggtacattgtttgctgggcacgctttaaaccatgggtccaattcccagcatct 563

                                                                       
Query: 364 ccaactaaatatagaaacaagggctactatgctgtctgcacta--aggtcaactaaggta 421
           ||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||
Sbjct: 564 ccaactaaatatagaaacaagggctactatgctgtctgcactccgaggtcaactaaggta 623

                                 
Query: 422 ttatataatgactaaactccaa 443
           ||||||||||||||||||||||
Sbjct: 624 ttatataatgactaaactccaa 645


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 443
Length of database: 845
Length adjustment: 10
Effective length of query: 433
Effective length of database: 835
Effective search space:   361555
Effective search space used:   361555
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information