XXXXXXXXXXXXXXXXXXXXXXTTTCAGAGGATCCGCGGAATTCAAATCT
TTTCATCTCCCACCTTGTACTTTACCCAGAGCCTCCCAGCTCCCACAACC
CTCTGCATTCCCAGACTGTGATGGCCCAGAACAGCTGGCTCAAGACCTCT
TTCCTTCGTTTTCTTGCTGCTGGCTGCCTTCCACATTAGCCCCCTGGGAG
TGAACTGTGAGGTTCAACCTCAGCCAAAAAAGAACAGCCACTCCCCACCC
TGTCTTCCATAGGGGTAAAAGACAGGGGCCATCTTGGCCTTGGATTTGGC
TTGCTATCCTGGTTTGGGTGGTAACACACACTTTTTACAAAACAGACATT
GCCTGGGGCTCAGTAGTTAAGAGCATTGACTGCTCTTTCAGAGGACCCAG
GTTCAATTCCCATCATCCATATGGTAACTAACAACTGTCTGTAACAGGAG
GATCCAATGCCCTCTTGTGGCTCCTGCAGACACTGCATGCACATGGTACA
TAGACATACACCTAGGCAAAACAACCATAAACATAGAAATAAATAATGAG
CAAGATTTTAAAACATAAAGAAAGAAATTCCTTGCCGGTTACTTTCACTT
GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGA
CATTNTNTATTTCNNAACGAGAAAATATCTCCATATATGGTTTTACCTTA
ATTTTCTCCCTTCATATTTTCATTTTTTGTAGTCT

GGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXTCTGAGCGTGTAAAAGCTCTAGAAGTAATGTCAAG
TAATGACAAATGGAATTGGATCACATTTTAAAGCTTCTGTTCAATGAAAG
AAATTATCAGTGGAGTGAAGAGATGCTGTTTGCCAATGGGAAATCTGACC
CGATTAATATCTAGATGGGACAAAACAAAATATCCACTTAGTAAATAAGC
AAATAAGTTGAACTAACAGTTCTCAAAAGAAGAAATACAAATAGCCAATG
GATATATGAAAAAAGGTTCAACATCCTTTAGTTATTAGGGAAATGAAAAG
TAAAACTTGTTTGTCATTTTATCTCATTCTGCTCAGAATGGCCATCCTCA
AGAAACTAGATAAGAAATGATGGTGAGGATATGGGAAAAGTGGAGCCTTT
ATTCACATCTTCTGAGAATATGAATCGTTACAGTCTCTGTGAAAATCAGT
ATGTGGGTTCCTTGAATATTAAACTACCACATGACCCAGCTATTCCACAG
ATTAATATATACTTTAACCACTTGATGCCAGTTCAATATATCACAGATAT
GCTTTCATTTTATTGTTATTTTGTTAATATATTATTAATAAATGTACATT
ATTATATTTATTATTGCTATACTGTTTACAATAGCCCAGATATGGAGCCA
GCCTAGATGCCCATCAACAGATAGATAGATAGATAGATAGATAG

Query= MSMg01no526_e03.b1 MSMg01no526_e03.b1 CHROMAT_FILE:
MSMg01no526_e03.b1 PHD_FILE: MSMg01no526_e03.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:01:07 2005
         (627 letters)



>mm_chr1_121390459_121391485
          Length = 1027

 Score = 1149 bits (594), Expect = 0.0
 Identities = 606/612 (99%), Gaps = 4/612 (0%)
 Strand = Plus / Plus

                                                                       
Query: 16  ggaattcaaatcttttcatctcccaccttgtactttacccagagcctcccagctcccaca 75
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 216 ggaattcaaatcttttcatctcccaccttgtactttacccagagcctcccagctcccaca 275

                                                                       
Query: 76  accctctgcattcccagactgtgatggcccagaacagctggctcaagacctctttccttc 135
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 accctctgcattcccagactgtgatggcccagaacagctggctcaagacctctttccttc 335

                                                                       
Query: 136 gttttcttgctgctggctgccttccacattagccccctgggagtgaactgtgaggttcaa 195
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 gttttcttgctgctggctgccttccacattagccccctgggagtgaactgtgaggttcaa 395

                                                                       
Query: 196 cctcagccaaaaaagaacagccactccccaccctgtcttccataggggtaaaagacaggg 255
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 cctcagccaaaaaagaacagccactccccaccctgtcttccataggggtaaaagacaggg 455

                                                                       
Query: 256 gccatcttggccttggatttggcttgctatcctggtttgggtggtaacacacacttttta 315
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 gccatcttggccttggatttggcttgctatcctggtttgggtggtaacacacacttttta 515

                                                                       
Query: 316 caaaacagacattgcctggggctcagtagttaagagcattgactgctctttcagaggacc 375
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 caaaacagacattgcctggggctcagtagttaagagcattgactgctctttcagaggacc 575

                                                                       
Query: 376 caggttcaattcccatcatccatatggtaactaacaactgtctgtaacaggaggatccaa 435
           ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
Sbjct: 576 caggttcaattcccatcatccatatggtagctaacaactgtctgtaacaggaggatccca 635

                                                                       
Query: 436 tgccctcttgtggctcctgcagacactgcatgcacatggtacatagacatacacctaggc 495
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 636 tgccctcttgtggctcctgcagacactgcatgcacatggtacatagacatacacctaggc 695

                                                                       
Query: 496 aaaacaaccataaacatagaaataaataatgagcaagattttaaaacataaagaaagaaa 555
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
Sbjct: 696 aaaacaaccataaacatagaaataaataatgagcaagattttaaaacataaagaaa---- 751

                                                                       
Query: 556 ttccttgccggttactttcacttgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg 615
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 752 ttccttgccggttactttcacttgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg 811

                       
Query: 616 tgtgtgtgtgtg 627
           ||||||||||||
Sbjct: 812 tgtgtgtgtgtg 823


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 95
Number of extensions: 30
Number of successful extensions: 30
Number of sequences better than 10.0: 1
Number of HSP's gapped: 27
Number of HSP's successfully gapped: 1
Length of query: 627
Length of database: 1027
Length adjustment: 10
Effective length of query: 617
Effective length of database: 1017
Effective search space:   627489
Effective search space used:   627489
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)