Query= MSMg01no527_e19.b1 MSMg01no527_e19.b1 CHROMAT_FILE:
MSMg01no527_e19.b1 PHD_FILE: MSMg01no527_e19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:02:30 2005
(581 letters)
>mm_chr1_24519217_24520197
Length = 981
Score = 1062 bits (549), Expect = 0.0
Identities = 570/577 (98%)
Strand = Plus / Minus
Query: 1 cacgcacacacgtgcacacacacatgcactaaatacataaaacataaaacagatcagttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 777 cacgcacacacgtgcacacacacatgcactaaatacataaaacataaaacagatcagttc 718
Query: 61 cctttcaatagcattggggagtactgattttgtgggcagaactaggtttaccctggctgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 717 cctttcaatagcattggggagtactgattttgtgggcagaactaggtttaccctggctgc 658
Query: 121 cagccgttctttgggctttgctcctatatttcagaatgagcactaaagtgactggtgtta 180
|||||||||| |||||||||||||||||||||||||||||| |||||||||||||| |||
Sbjct: 657 cagccgttctctgggctttgctcctatatttcagaatgagcgctaaagtgactggtatta 598
Query: 181 ccgacataatgttttagattaaatttttatagagccaacacttggcatcagcatgtttgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 597 ccgacataatgttttagattaaatttttatagagccaacacttggcatcagcatgtttgg 538
Query: 241 actatgtcctcttgaagttttcatggtaattcatacacctccctcctttttgatccttgg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 537 actatgtcctcttgaagttttcatggtaattcatacacctccctcctttttgatccttgg 478
Query: 301 tgggatccagtatgctcactctcctctggtggactaacggcaattagaagtgattataag 360
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 taggatccagtatgctcactctcctctggtggactaacggcaattagaagtgattataag 418
Query: 361 cctttaagtagggaaagaggcaagatcagttaacatttgccgtagcggaaacctagtact 420
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 cctctaagtagggaaagaggcaagatcagttaacatttgccgtagcggaaacctagtact 358
Query: 421 tttaactacaggaatcacagaatgtcagctaaagacacatgggtgccagcactccaggca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 tttaactacaggaatcacagaatgtcagctaaagacacatgggtgccagcactccaggca 298
Query: 481 catggtatgtaaaagcttgcagctagctaagctgtcagcactcctttttctccgaaacgg 540
||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||
Sbjct: 297 catggtatgtaaaagcttgcagctagctaagctatcagcactcctttttctacgaaacgg 238
Query: 541 gttgctggcagtgtgaataccgtgtcattgtgctttg 577
|||||||||||||||||||||||||||||||||||||
Sbjct: 237 gttgctggcagtgtgaataccgtgtcattgtgctttg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 581
Length of database: 981
Length adjustment: 10
Effective length of query: 571
Effective length of database: 971
Effective search space: 554441
Effective search space used: 554441
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no527_e19.g1 MSMg01no527_e19.g1 CHROMAT_FILE:
MSMg01no527_e19.g1 PHD_FILE: MSMg01no527_e19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:02:30 2005
(602 letters)
>mm_chr1_24317015_24318015
Length = 1001
Score = 1156 bits (598), Expect = 0.0
Identities = 601/602 (99%), Gaps = 1/602 (0%)
Strand = Plus / Plus
Query: 1 aacagagtcactcataaaaagctccaattccaattatttctcaattcccttgttttttat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aacagagtcactcataaaaagctccaattccaattatttctcaattcccttgttttttat 260
Query: 61 taccctctcaattgcctcttaagcccacctcttgaatctaggcagttaaaacctgcctgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 taccctctcaattgcctcttaagcccacctcttgaatctaggcagttaaaacctgcctgc 320
Query: 121 ctgttaaaacccattgctgtgtttatattttacagaaatcttctgtggaacttgaggaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctgttaaaacccattgctgtgtttatattttacagaaatcttctgtggaacttgaggaag 380
Query: 181 caaaagctcattaattcttacttgttttcaaaacaaatgccttcaatgttttatttataa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 caaaagctcattaattcttacttgttttcaaaacaaatgccttcaatgttttatttataa 440
Query: 241 atgaaaataaatgccgtacttctcattctttaattttttttaacttggaaaacaatcccg 300
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 441 atgaaaataaatgccgtacttctcattctttaa-tttttttaacttggaaaacaatcccg 499
Query: 301 agccaatcttaaaggtttccagaacacaatgaatatcaataaaaccaataataaatgatg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 agccaatcttaaaggtttccagaacacaatgaatatcaataaaaccaataataaatgatg 559
Query: 361 atagcttgtaatgggaaatatagttccaaccaggaaaatagatctattttacagtgtcat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 atagcttgtaatgggaaatatagttccaaccaggaaaatagatctattttacagtgtcat 619
Query: 421 aatttcccatactaccatcaaggttaatatatgccagatggctttcttactttcattaag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 aatttcccatactaccatcaaggttaatatatgccagatggctttcttactttcattaag 679
Query: 481 aactattagcaccaaaactgtttaaaccaacaacaattcatcattctaattggtttttct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 aactattagcaccaaaactgtttaaaccaacaacaattcatcattctaattggtttttct 739
Query: 541 aagagttaatgtgagttatgcagggcaagaataatgtcctgagcatcactgtggcttact 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 aagagttaatgtgagttatgcagggcaagaataatgtcctgagcatcactgtggcttact 799
Query: 601 gt 602
||
Sbjct: 800 gt 801
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 602
Length of database: 1001
Length adjustment: 10
Effective length of query: 592
Effective length of database: 991
Effective search space: 586672
Effective search space used: 586672
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
