NTTTTCCCTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
CGCGGAATTCTCCACATCAGCAACAGAAAAATGTCAAAATGAGACCTCAG
AAGGGGCTCAGCAGAAGCTCTTTGTGGAAATGGTCTGACCCCTGCATGCC
AGCACTCTTCATGGTCTAGTACCCAGCTAACCAACAATGGCCCCATATCT
GGGATTCTTGAGGCCTTGAGATCTGACACTGAAAGAAAACCTAAGGCTTC
TACTCACACATTCAACCCATCAGTCTTCGCCAGTATAAAACATGGCAGCT
GCTTGCTTGCTTGCTTTGGTTTGGGTTTTGGCTTTTACAAGATGGGGTTA
CTCTGTGTAGCTATGGCTGTCCTAACTCACTCTGTAGACCAGGCTGGCCT
CAAACAGAAGTTTCCTTTGCCCTTTCCTTTGCCTCCCAAATACTAAGATG
GTGGTGTATGCACCACCACTGCCTGGCTGCAGCTGTATTTTAAAACCCCA
CTATGCTCCATCAGGTCGGGCAGCATAGTGCATGTTTCTGGCTTATTTCT
AAACCAATTCATTTTGGATTGATCCCCCCCCCCCCCGGCATAGATATAAG
AATGGCATAAGGGAGCCGGGCGTGGCAGCGCACGCCTTTGATCCTCAAGA
GGCGGGTGGATTTCTGAGTTCAAGGCCAGCCTGGTCTACAAAGTGAGTTC
CAGAACAGCCTGTGCTATACAGAGAAACCCTGTCTCGAAACAAACAAAAA
AACN

NNNAACTATGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXATTACTAGAACTCAGAAACTC
AGAAATCCACTTGCCTCTGCCTTCCAAGTGCTGAGATTAAAGGTGTGCAC
CACTGTCTTAGTCAGGGTTTCTATTCCTGCACAAACATCATGACCAAGAA
GCAAGTTGGGGAGGAAAGGGTTTATTCAGCTTACACTTTCCACATTGCTG
TTCATCACCAAAGGAAGTCAGGACTGGAACTCAGGCAGGTCAGGAAGCAG
GAGCTGATGCAGAGGCCATGGAGGAATGTTACTTACTGGCTTGCTTCCCC
TGGCTTGCTCAGCTTGCTCTCTTATAGAACCCAAGACTACCAGCCCAGAG
ATGGCACCACCCACAAGAGGACCTCCCCCCTTGATCACTAATTGAGAAAA
TGCCTTATGGATCTTATGGAGGCATCTCTCCAACTGAAGCTCTTTTCTCT
GTGATTACTCCAGCTGTGTCAAGTTGACACATAACTAGCCAGTACAGCCA
CCATACCTGACTTTTGCTTGTGATTTTTGTTCATAATGTTACTTCACTTT
AAAAATCACAATCGCTTCTCAGCCTTTTGGCTAAGATCAAGTGCACTTTA
AAAATCACCATGATAACAAGGGTAAGGAACATTCTAAATCACCCCATACA
GTACTGGGCATAAAATACTAATGTCTATATGTTATCAATATTCCC

Query= MSMg01no528_h16.b1 MSMg01no528_h16.b1 CHROMAT_FILE:
MSMg01no528_h16.b1 PHD_FILE: MSMg01no528_h16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:04:05 2005
         (620 letters)



>mm_chr1_130134502_130135523
          Length = 1022

 Score = 1145 bits (592), Expect = 0.0
 Identities = 611/618 (98%), Gaps = 2/618 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattctccacatcagcaacagaaaaatgtcaaaatgagacctcagaaggggctcagcag 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctccacatcagcaacagaaaaatgtcaaaatgagacctcagaaggggctcagcag 264

                                                                       
Query: 65  aagctctttgtggaaatggtctgacccctgcatgccagcactcttcatggtctagtaccc 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aagctctttgtggaaatggtctgacccctgcatgccagcactcttcatggtctagtaccc 324

                                                                       
Query: 125 agctaaccaacaatggccccatatctgggattcttgaggccttgagatctgacactgaaa 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 agctaaccaacaatggccccatatctgggattcttgaggccttgagatctgacactgaaa 384

                                                                       
Query: 185 gaaaacctaaggcttctactcacacattcaacccatcagtcttcgccagtataaaacatg 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gaaaacctaaggcttctactcacacattcaacccatcagtcttcgccagtataaaacatg 444

                                                                       
Query: 245 gcagctgcttgcttgcttgctttggtttgggttttggcttttacaagatggggttactct 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gcagctgcttgcttgcttgctttggtttgggttttggcttttacaagatggggttactct 504

                                                                       
Query: 305 gtgtagctatggctgtcctaactcactctgtagaccaggctggcctcaaacagaagtttc 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gtgtagctatggctgtcctaactcactctgtagaccaggctggcctcaaacagaagtttc 564

                                                                       
Query: 365 ctttgccctttcctttgcctcccaaatactaagatggtggtgtatgcaccaccactgcct 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 ctttgccctttcctttgcctcccaaatactaagatggtggtgtatgcaccaccactgcct 624

                                                                       
Query: 425 ggctgcagctgtattttaaaaccccactatgctccatcaggtcgggcagcatagtgcatg 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 ggctgcagctgtattttaaaaccccactatgctccatcaggtcgggcagcatagtgcatg 684

                                                                       
Query: 485 tttctggcttatttctaaaccaattcattttggattgat--cccccccccccccggcata 542
           ||||||| |||||||||||||||||||||||||||||||  |||||||||||||||||||
Sbjct: 685 tttctggtttatttctaaaccaattcattttggattgattccccccccccccccggcata 744

                                                                       
Query: 543 gatataagaatggcataagggagccgggcgtggcagcgcacgcctttgatcctcaagagg 602
           |||||||||||||||||||||||||||||||||||||||| |||||||||||   |||||
Sbjct: 745 gatataagaatggcataagggagccgggcgtggcagcgcatgcctttgatccgggagagg 804

                             
Query: 603 cgggtggatttctgagtt 620
           ||||||||||||||||||
Sbjct: 805 cgggtggatttctgagtt 822


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 620
Length of database: 1022
Length adjustment: 10
Effective length of query: 610
Effective length of database: 1012
Effective search space:   617320
Effective search space used:   617320
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)