NNAACCAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXC
GCGGAATTCCTGTTCTAATCCCTTCAATGATGAACTACTATGTGGAAGTA
TAAGCCGAGTAAATCCTTTCCTTCCCAGCTTGCTTTTGGTCAAGGTGTTT
CATCGCAGTAATAGAAACTCTACCTAAGACACTCAGTCTCACTGTGAAAG
TATGAGAACCTGAGTTCCATTCTGAGAGCACACAGAAAACAAAAGCATTG
TGGTTTGTGTCTGTAACCACAATACTAGGGAGGTAGAGATAGGTGAATCC
CAGAATTACTGACCACTCAACCTAGACTGGAGAACTTCAGGCCAATGAGA
AACTGTCTCAAAACACAACTCAACAGCTCCTAAGAATGACACCCAAGGTT
GACCTCTGGTCTCTAATACACATACATGTGCATGTACACACAGACACATA
TACTCGCACTCACACTCACACTCACACACACACACACTTGCATATATATA
CACACACATGCACACACTCGCATGCAGTATCAAACATAATTAAAAATGAG
TGAAAAGTTCTGATTCTGCTGAGATACAGTGCTGAGTATTCTATCACATG
GGAACACTTATGTACCACATCACATTTATTATAAAAGAAGGTGGTCTGAA
CCCTACAACACTGAAATAAAATTCTCAAACAAGCACCTGGGTTACAGAAA
GTAAAGTCAACAGGTTTGGGAAGACCCAAGCTTAGAGGAAGTTCATCA

NNCCCGATATTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXCTCCATTGTCAACGGCATTCCTG
ACTGTGGTGGGCTGCTGTATCGTTTCTCACACCCTGGTTGGCTCCCGAGG
TTCACTCTTTGATTATGAAATGATTTTAGGTCTGCATTTGAGATTATGAT
TTAGATTCCTGGTGGCTTAGTGATGGCACATGACCTCAAAGTATGGCTCC
TTTCTGTAGCACCATCAGGAATGGAGATGTGAATTCTCAGGCCTTGCCCC
AGACCCCAGGCTGAGAACCACTCTCTTGAGTCTGTCAGAGGAATGGGATG
AAGGCAGAGTTGGTACAGGATTGGTGGACTCAGACCATCCTCATCTTGCC
TCTTGGAATTTCCTTGACATTGTGAACTTGGCTCTTTCTCAGTTTTCCAG
CCAACAACTTTTTGAACTAAACCCCATTCTCCCCCTGGGATGGATAGTAA
TCCTTGGAGTCGAAGACTAAAGCCATCCAGAGGAAACAAACTCTTTCCCC
AGCTGTTCATGTGCACGGGGACCTGCCCAGTGGGACCTGCACTTTGTTGG
GATGCAAAGCCATTCTTGTATTCCCCTTCTCCTCTCCAACTGCGGTCTTT
AGGCTCAGACAGGAACAATAAGAGCGTGTATCAGGTCCTATGCCCTGTCC
TCTGAAACAGATGTTGAGGCCATGGTTCACTCAAACCTTTAG

Query= MSMg01no528_n15.g1 MSMg01no528_n15.g1 CHROMAT_FILE:
MSMg01no528_n15.g1 PHD_FILE: MSMg01no528_n15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:04:35 2005
         (561 letters)



>mm_chr1_194548933_194549893
          Length = 961

 Score = 1000 bits (517), Expect = 0.0
 Identities = 529/533 (99%)
 Strand = Plus / Minus

                                                                       
Query: 29  ggtgggctgctgtatcgtttctcacaccctggttggctcccgaggttcactctttgatta 88
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961 ggtgggctgctgtatcgtttctcacaccctggttggctcccgaggttcactctttgatta 902

                                                                       
Query: 89  tgaaatgattttaggtctgcatttgagattatgatttagattcctggtggcttagtgatg 148
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 901 tgaaatgattttaggtctgcatttgagattatgttttagattcctggtggcttagtgatg 842

                                                                       
Query: 149 gcacatgacctcaaagtatggctcctttctgtagcaccatcaggaatggagatgtgaatt 208
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 841 gcacatgacctcaaagtatggctcctgtctgtagcaccatcaggaatggagatgtgaatt 782

                                                                       
Query: 209 ctcaggccttgccccagaccccaggctgagaaccactctcttgagtctgtcagaggaatg 268
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 ctcaggccttgccccagaccccaggctgagaaccactctcttgagtctgtcagaggaatg 722

                                                                       
Query: 269 ggatgaaggcagagttggtacaggattggtggactcagaccatcctcatcttgcctcttg 328
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ggatgaaggcagagttggtacaggattggtggactcagaccatcctcatcttgcctcttg 662

                                                                       
Query: 329 gaatttccttgacattgtgaacttggctctttctcagttttccagccaacaactttttga 388
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 gaatttccttgacattgtgaacttggctctttctcagttttccagccaacaactttttga 602

                                                                       
Query: 389 actaaaccccattctccccctgggatggatagtaatccttggagtcgaagactaaagcca 448
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 actaaaccccattctccccctgggatggatagtaatccttggagtcgaagactaaagcca 542

                                                                       
Query: 449 tccagaggaaacaaactctttccccagctgttcatgtgcacggggacctgcccagtggga 508
           |||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||
Sbjct: 541 tccagaggaaacaaactctttccccagctgttcatgtgcgtggggacctgcccagtggga 482

                                                                
Query: 509 cctgcactttgttgggatgcaaagccattcttgtattccccttctcctctcca 561
           |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cctgcactttgttgggatgcaaagccattcttgtattccccttctcctctcca 429


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 561
Length of database: 961
Length adjustment: 10
Effective length of query: 551
Effective length of database: 951
Effective search space:   524001
Effective search space used:   524001
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)