NNNTTCAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
CGCGGAATTCTACATAGAACCAGAGACACTGAAATTCATAGAGGAGAAAG
TGGGGAAAAGCCTCAAAGATATGGGCACAGGGGAAAAATTCCTAAACTGA
ACAGCAATGTCTTATGCTGTAAGATCAAGAATTGACAAATGGGCCAAAGA
CACTGTCAATAAGACAAAAAAGTCACCAACAGATTGGGAAAGGATTTTTA
CCAATTCTAAATCTTATATGGGACTAATATCCAATATATACAAAGAGCTC
AAGAAGCTGGACTCCAGAAACTCAAATAACCCCATTTAAAAATGGGGTAC
AGAGCAAAACAAAGAATTCTCAACTTAGGAATACCAAATGGCTGAGAAGC
ACTTGAAAAAATGTTCAACATCCTTAATCATCAGGGAAATGCAAATCAAA
ACAACCCTGAGATTCTACCTCACACCAGTCAGAATGACTAAGTTCAAAAA
TTCAGGTGACATCAGATGCTGGCAAAGATGTGGAGAAAGAGGAACACTCC
TCCATTGTTGGTGGGATTGCAAGCTTGAACAACAACTCTGGAAGTCAATC
TGGAGGTTCCTCAGAAAATTGGACATAATACTATCAGACTATCCAGCAAT
ACAACTCCTGGGCATATACCCAGAAGAAGTTCCAACTGGTAATAAGAACA
CATGCTCAACTATGTTCATAGCAGTCTTATTTATAATAGCCAGAAGCT

NCCCCCATGAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXAATAAAAATGTGGTTTAGTCC
TCGAAGTAAGAAGGTTAGATATGTTGTGACTAAAGTGTCAGTACAAACAC
AGCCTCAAAAGGCAAAGGACGACAAAGCCCAGGAAGCCTCAATGTATGAA
TTTGTTTCCGCAACTCCCCCTGTAGCTGTTCCTAAGAGTGCTAAAACAGC
TTCTAGAACATCTGCAAAAAAGCATCCAAAGAAATCTGTAGCTAAGATCA
ACAGGGAGGAGAATTTAAGGCCAGAAACAAAGGATAGTAGATTTGATTCT
AAAGAGGAGCTGAAGGAAGAGAAGGTTGTCTCCTGTAGCCAAATACCAGT
TATGGAGAGACCACGGGTAAATGGTGAAATAGACTTATTAGCAAGTGGTT
CTGTTGTAGAACCTGAATGTTCTGGAAGCTTGACTGAAGTCTCTTTACCA
TTGGCTGAGCATATAGTGTCTCCAGACACTGTGAGCAAGAATGAAGAGAC
TCCGGAGAAGAAGGTCTGTGTAAAAGATCTTCGTTCAGGAGGGAGTAATG
GAAATCGTAAAGGCTGCCACAGGCCTACCACTTCTACTTCTGACAGTTGT
GGGAGCAACATTCCGAGCACCAGCAGAGACATCGGTGAGCCAACATTGCT
TGCAGAAAAAGTAGTGTTGGTTGACTGCTCTTCACTGCCTTCAGGCCAGC
TACAGGTTGAT

Query= MSMg01no528_o11.g1 MSMg01no528_o11.g1 CHROMAT_FILE:
MSMg01no528_o11.g1 PHD_FILE: MSMg01no528_o11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:04:39 2005
         (680 letters)



>mm_chr1_71121114_71122193
          Length = 1080

 Score = 1284 bits (664), Expect = 0.0
 Identities = 676/680 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   aataaaaatgtggtttagtcctcgaagtaagaaggttagatatgttgtgactaaagtgtc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 880 aataaaaatgtggtttagtcctcgaagtaagaaggttagatatgttgtgactaaagtgtc 821

                                                                       
Query: 61  agtacaaacacagcctcaaaaggcaaaggacgacaaagcccaggaagcctcaatgtatga 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 820 agtacaaacacagcctcaaaaggcaaaggacgacaaagcccaggaagcctcaatgtatga 761

                                                                       
Query: 121 atttgtttccgcaactccccctgtagctgttcctaagagtgctaaaacagcttctagaac 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 760 atttgtttccgcaactccccctgtagctgttcctaagagtgctaaaacagcttctagaac 701

                                                                       
Query: 181 atctgcaaaaaagcatccaaagaaatctgtagctaagatcaacagggaggagaatttaag 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 700 atctgcaaaaaagcatccaaagaaatctgtagctaagatcaacagggaggagaatttaag 641

                                                                       
Query: 241 gccagaaacaaaggatagtagatttgattctaaagaggagctgaaggaagagaaggttgt 300
           |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 640 gccagaaacaaaggatagtagatttgattccaaagaggagctgaaggaagagaaggttgt 581

                                                                       
Query: 301 ctcctgtagccaaataccagttatggagagaccacgggtaaatggtgaaatagacttatt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 580 ctcctgtagccaaataccagttatggagagaccacgggtaaatggtgaaatagacttatt 521

                                                                       
Query: 361 agcaagtggttctgttgtagaacctgaatgttctggaagcttgactgaagtctctttacc 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 agcaagtggttctgttgtagaacctgaatgttctggaagcttgactgaagtctctttacc 461

                                                                       
Query: 421 attggctgagcatatagtgtctccagacactgtgagcaagaatgaagagactccggagaa 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 attggctgagcatatagtgtctccagacactgtgagcaagaatgaagagactccggagaa 401

                                                                       
Query: 481 gaaggtctgtgtaaaagatcttcgttcaggagggagtaatggaaatcgtaaaggctgcca 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 gaaggtctgtgtaaaagatcttcgttcaggagggagtaatggaaatcgtaaaggctgcca 341

                                                                       
Query: 541 caggcctaccacttctacttctgacagttgtgggagcaacattccgagcaccagcagaga 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 340 caggcctaccacttctacttctgacagttgtgggagcaacattccgagcaccagcagagg 281

                                                                       
Query: 601 catcggtgagccaacattgcttgcagaaaaagtagtgttggttgactgctcttcactgcc 660
           ||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 280 catcggtgagccagcattgcttgcagaaaacgtagtgttggttgactgctcttcactgcc 221

                               
Query: 661 ttcaggccagctacaggttg 680
           ||||||||||||||||||||
Sbjct: 220 ttcaggccagctacaggttg 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 680
Length of database: 1080
Length adjustment: 10
Effective length of query: 670
Effective length of database: 1070
Effective search space:   716900
Effective search space used:   716900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)