ACTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCACAAATTGCTCTTCTCTAACTCTTTGAAGAATTGAGTTGGAATTT
TGATGGGGAATGCATTGAATCTGTATATTGCTTTTGGCAAGATTTTCATA
TATACTTTATTAATTCTGCCAATCCAAGAAATTGGAAGTTTTTTCTGTCT
TCTGAGATCTTCTTAGATTTCTTTCTTCAGAGACTTGAGGTTCTTATTTT
ACAGATCTTTCACTTCCTTAGTTAGAGTTACACCAAGGTATTTAATATTA
TTTGTGACAAATGTGAAGGGTGTTGTTTCCCTAATTTCTTTCTCAGCCTG
TTTATCCTTTGAGTATGGGAAGGTCACTGATTTGTTTGAGTTAATTTTAT
ATCCAGCTAATGCGCTGAAGTTGTTTATCAGGTTTAGGAGTTCTCTGGTG
GAATTTTTAGGGTTACTTTTATATATGTGTGTGTGTGTGTGTGTGTGTGA
TCATATTATCATCTGCAGATAGTGATATTTTGACTTCTTCCTTTCCAATT
TGTATTACCTTGATCTCCTTTTGTTGTCGAATTGCTCTGGCTAGGGCTTC
ATGTACAATGTTGAATAGGTAGGGAGAAAGTGGGCAGCCTTGTCTAGTCC
CAGATTTTAGTGGGATTGCTTCAAGTTTCTCTCCATTTAGTTTGATATTG
GCTACTGGTTTGCAGTATATTGCTTTTACTATGTTTATGTATGGGCCTTG
AAATCCT

CCAATGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXAGTTGTAAGACAAAGATGCTCTCAGAA
CCACAGGACATCCAGCAACTGTAGATTACAGAGAGAAAAGCAAAGTCTTA
AGTGGAAAGAACAGGTCAGGTGAGCAAGGGACTCAGAGCTTGGCAGTAAG
GGCACTGATGCCCAGAGAAGGAGCAATGATGTCCCGCCAGAGAAAACTTC
AGGTTTGGCTGTTTCTTTTCCAGTGACAGGGTCTCCCACGCCACAGAGAA
GACTCTAATTTGTTTTGTACCACAGGAGTTCCTTAAAGCCCTGCTCTCCT
GCTCCTATTAACCATGTGATAGGATTTTAGGCAAGGGACACTAATACCTG
GCCACTTAGAGAACTTTAAATGAAGAAGCATCCTTTCCTAGCTCATAGAG
TATCGAGTATGCTTCTAGGTAAGAAGGGCACAGATGTGTCCCTGACAATT
AACTAAACTCTGGTATCTTTGTGAAGTAGAGAACAAGTCAGTCCCTTACA
GATTTAGGCTCCATTATTCTTCAGTGAGTAAATTATTCTATAAAGTTGTC
AGGCAGACTATCACTATGTTATAATTCTGCTAGATATGACTGTAGACTTA
GCATTGGTAAATATAAGAAAGTAATATTTATCTTCCAACAAAATTCTAAT
AAATTACTTCTGGATAAGAGAGGCATTATACTAACATTATCTCTTTGTAA
TTCAGCTTGTATTCATCTTTCCCGGGT

Query= MSMg01no530_c08.g1 MSMg01no530_c08.g1 CHROMAT_FILE:
MSMg01no530_c08.g1 PHD_FILE: MSMg01no530_c08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:06:22 2005
         (643 letters)



>mm_chr1_25746972_25748014
          Length = 1043

 Score = 1151 bits (595), Expect = 0.0
 Identities = 631/643 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   agttgtaagacaaagatgctctcagaaccacaggacatccagcaactgtagattacagag 60
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||
Sbjct: 201 agttgtaagacaaagatgctctcagaaccacaggacaaccagcaactgtagattacaaag 260

                                                                       
Query: 61  agaaaagcaaagtcttaagtggaaagaacaggtcaggtgagcaagggactcagagcttgg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 261 agaaaagcaaagtcttaagtggaaagaacaggtcaggtgagcaagggactcagaggttgg 320

                                                                       
Query: 121 cagtaagggcactgatgcccagagaaggagcaatgatgtcccgccagagaaaacttcagg 180
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 321 cagtaagggcactgatgcccagagaaggagcaatgatgtccagccagagaaaacttcagg 380

                                                                       
Query: 181 tttggctgtttcttttccagtgacagggtctcccacgccacagagaagactctaatttgt 240
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tttggctgcttcttttccagtgacagggtctcccacgccacagagaagactctaatttgt 440

                                                                       
Query: 241 tttgtaccacaggagttccttaaagccctgctctcctgctcctattaaccatgtgatagg 300
           |||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| |
Sbjct: 441 tttgtaccacaggagttccttaaagccccgctcttctgctcctattaaccatgtgataag 500

                                                                       
Query: 301 attttaggcaagggacactaatacctggccacttagagaactttaaatgaagaagcatcc 360
           |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
Sbjct: 501 attttaggcaagggacactaatacctggccacttagagaactttaaataaagaagcattc 560

                                                                       
Query: 361 tttcctagctcatagagtatcgagtatgcttctaggtaagaagggcacagatgtgtccct 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tttcctagctcatagagtatcgagtatgcttctaggtaagaagggcacagatgtgtccct 620

                                                                       
Query: 421 gacaattaactaaactctggtatctttgtgaagtagagaacaagtcagtcccttacagat 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gacaattaactaaactctggtatctttgtgaagtagagaacaagtcagtcccttacagat 680

                                                                       
Query: 481 ttaggctccattattcttcagtgagtaaattattctataaagttgtcaggcagactatca 540
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct: 681 ttaggctccattattcttcagtgagtaaattattctataaagttgtcaggcagaataaca 740

                                                                       
Query: 541 ctatgttataattctgctagatatgactgtagacttagcattggtaaatataagaaagta 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 ctatgttataattctgctagatatgactgtagacttagcattggtaaatataagaaagta 800

                                                      
Query: 601 atatttatcttccaacaaaattctaataaattacttctggata 643
           |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 atatttatcttccaacaaaattctaataaattacttctggata 843


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 643
Length of database: 1043
Length adjustment: 10
Effective length of query: 633
Effective length of database: 1033
Effective search space:   653889
Effective search space used:   653889
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)