Query= MSMg01no530_n14.b1 MSMg01no530_n14.b1 CHROMAT_FILE:
MSMg01no530_n14.b1 PHD_FILE: MSMg01no530_n14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:07:18 2005
(332 letters)
>mm_chr1_154318333_154319064
Length = 732
Score = 634 bits (328), Expect = 0.0
Identities = 331/332 (99%)
Strand = Plus / Plus
Query: 1 tctccgcaacacagtgagacgtctctcatctcaaagaaggaagaggaggaggacaaagag 60
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctcagcaacacagtgagacgtctctcatctcaaagaaggaagaggaggaggacaaagag 260
Query: 61 gaagaggaggaaaacccactgatgtattttatatactgttatgttcagtgggaaacaaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gaagaggaggaaaacccactgatgtattttatatactgttatgttcagtgggaaacaaat 320
Query: 121 ttctaaatctctcattgtttccgtttgcctatctatgatatagagttgatgttttctggt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttctaaatctctcattgtttccgtttgcctatctatgatatagagttgatgttttctggt 380
Query: 181 ctcttgtgccttgtccctagagtggcggaggagtcattgcatacaaacaccaagggccca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctcttgtgccttgtccctagagtggcggaggagtcattgcatacaaacaccaagggccca 440
Query: 241 gctacatccatgcagacactcagtggctgtaaattcttctttcaggtcttaccctgatga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gctacatccatgcagacactcagtggctgtaaattcttctttcaggtcttaccctgatga 500
Query: 301 aatcggaccaaagcactggccaaactcccggt 332
||||||||||||||||||||||||||||||||
Sbjct: 501 aatcggaccaaagcactggccaaactcccggt 532
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 332
Length of database: 732
Length adjustment: 9
Effective length of query: 323
Effective length of database: 723
Effective search space: 233529
Effective search space used: 233529
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no530_n14.g1 MSMg01no530_n14.g1 CHROMAT_FILE:
MSMg01no530_n14.g1 PHD_FILE: MSMg01no530_n14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:07:18 2005
(379 letters)
>mm_chr1_154457801_154458579
Length = 779
Score = 607 bits (314), Expect = e-178
Identities = 349/361 (96%), Gaps = 2/361 (0%)
Strand = Plus / Minus
Query: 20 cctagagatacaatggtttgagttaccagtcaggaatgtacctctgggaacttcatttct 79
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 579 cctagagataaaatggtttgagttaccagtcaggaatgtacctctgggaacttcatttct 520
Query: 80 gctgagcgccaaagtgatcctgctgagggtttttaatctatgttatatacctgataccta 139
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 gctgagctccaaagtgatcctgctgagggtttttaatctatgttatatacctgataccta 460
Query: 140 acgctgtagtcttccaaagaggactatgaacccagtatggagctggtctggctttactct 199
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 acgctgtagtcttccaaagaggactatgaacccagtatggagctggtctggctttactct 400
Query: 200 gttgaatgtttattcaaagggaccaggcactcttcgtgtgccaaacgatgcagggagtgc 259
|||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||
Sbjct: 399 gttgaatgtttattcaaagggaccaggcactctttgtgtgccaaacgatacagggagtgc 340
Query: 260 gtgcgatcca-gcctcttgtgctgagatggtgaggtaggcttgctgtgtggctgtgttct 318
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 gtgcgatccaagcctcttgtgctgagatggtgaggtaggcttgctgtgtggctgtgttct 280
Query: 319 gagaggtgctcctctcattgggactcaactgacnaaaggagtcaaatggaagtgcagctc 378
|||||||||||||||| | |||||||| ||||| |||||||||||||| || | ||||||
Sbjct: 279 gagaggtgctcctctcgtcgggactcagctgacaaaaggagtcaaatgaaaat-cagctc 221
Query: 379 a 379
|
Sbjct: 220 a 220
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 379
Length of database: 779
Length adjustment: 9
Effective length of query: 370
Effective length of database: 770
Effective search space: 284900
Effective search space used: 284900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
