Query= MSMg01no531_c16.b1 MSMg01no531_c16.b1 CHROMAT_FILE:
MSMg01no531_c16.b1 PHD_FILE: MSMg01no531_c16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:07:43 2005
(463 letters)
>mm_chr1_100080713_100081572
Length = 860
Score = 853 bits (441), Expect = 0.0
Identities = 451/455 (99%), Gaps = 3/455 (0%)
Strand = Plus / Minus
Query: 5 gaattctttaaaactccaagcaccacattatccatccattccctgtgttttgccatcacc 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 656 gaattctttaaaactccaagcaccacattatccatccattccctgtgttttgccatcacc 597
Query: 65 atcacagtgaaggacagcatcagtaaagtcgtatgctccttacgtcttcaatctgatcat 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 596 atcacagtgaaggacagcatcagtaaagtcgtatgctccttacgtcttcaatctgatcat 537
Query: 125 gaaagttaaaagcagaaaagactacgcaagagcaatgcaacagaggtcaaactgtggaag 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 536 gaaagttaaaagcagaaaagactacgcaagagcaatgcaacagaggtcaaactgtggaag 477
Query: 185 cttcatgttagactgaataatttggttaacagtatgtttcctaatggcttgaagattact 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 cttcatgttagactgaataatttggttaacagtatgtttcctaatggcttgaagattact 417
Query: 245 atttctaacttataagaaagtcagggaaaaaaatatcatcgtaaaatataagtccataga 304
|||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||
Sbjct: 416 atttctaacttataagaaagtcaggg-aaaaaatatcatcgtaaaatgtaagtccataga 358
Query: 305 aaatacattttaaattagcaagatatattgttaataatcacattgatttagagtaacttc 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 aaatacattttaaattagcaagatatattgttaataatcacattgatttagagtaacttc 298
Query: 365 tgaaagaattcaggaaaacatctgtatattttttaccttttgttggaatggaagacaaaa 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 tgaaagaattcaggaaaacatctgtatattttttaccttttgttggaatggaagacaaaa 238
Query: 425 tagtatgtctagtgggtntgtatgtgtgtgtatgc 459
|||||||||||||||| |||||||||||||||||
Sbjct: 237 tagtatgtctagtggg--tgtatgtgtgtgtatgc 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 463
Length of database: 860
Length adjustment: 10
Effective length of query: 453
Effective length of database: 850
Effective search space: 385050
Effective search space used: 385050
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no531_c16.g1 MSMg01no531_c16.g1 CHROMAT_FILE:
MSMg01no531_c16.g1 PHD_FILE: MSMg01no531_c16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:07:43 2005
(647 letters)
>mm_chr1_99920804_99921850
Length = 1047
Score = 1205 bits (623), Expect = 0.0
Identities = 641/647 (99%)
Strand = Plus / Plus
Query: 1 agaggtcaggcttgctcagtcaaaccaagatttatctggcctgggtcccatgcagccctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agaggtcaggcttgctcagtcaaaccaagatttatctggcctgggtcccatgcagccctt 260
Query: 61 cttaggaggctccaataattacctaaccactttctaatagactccacctactaaaagatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cttaggaggctccaataattacctaaccactttctaatagactccacctactaaaagatt 320
Query: 121 cacaccacaacatgaccagacttctgaaacacaaacatgtctccccgcatatggctcttt 180
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 321 cacaccacaacatgaccagacttctaaaacacaaacatgtctccccgcatatggctcttt 380
Query: 181 agcagggatacaccaaattcacaccatatcagaacataacagagtggtcattctagaaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agcagggatacaccaaattcacaccatatcagaacataacagagtggtcattctagaaaa 440
Query: 241 tttaaacttcttaattaaaacagtttttttgagactaagtattactgtatctccaggtta 300
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 441 tttaaacttcttaattaaaacagtttttttgagactaagtatcactgtatctccaggtta 500
Query: 301 cccttgaatttgctatatagccaaagataaccttgaccttctattcctcctgtgtcttct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cccttgaatttgctatatagccaaagataaccttgaccttctattcctcctgtgtcttct 560
Query: 361 tccagagtgttgggattatagctatgtaacgcatgtggagctgggaactgaaaccagggc 420
|||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||
Sbjct: 561 tccagagtgttgggattatagctatgcaatgcatgtggagctgggaactgaaaccagggc 620
Query: 421 tttgtgaacactgggcattacaacatcagttgagcctcgacacaacccaacatttcttaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tttgtgaacactgggcattacaacatcagttgagcctcgacacaacccaacatttcttaa 680
Query: 481 ttttaaaatgaagaataaatagatctttccactaccacaggattaattcagaaacactgt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ttttaaaatgaagaataaatagatctttccactaccacaggattaattcagaaacactgt 740
Query: 541 cacctgtttttaaaatagcaggaggggagcagggcaggacagagatttagcacgttgaac 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 cacctgtttttaaaatagcaggaggggagcagggcaggacagagatttagcacgttgaac 800
Query: 601 aggaagcctgaaaatttcataactgaatggatacagcaaagcagaac 647
||||||||||||||||||| ||| |||||||||||||||||||||||
Sbjct: 801 aggaagcctgaaaatttcaaaacggaatggatacagcaaagcagaac 847
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 647
Length of database: 1047
Length adjustment: 10
Effective length of query: 637
Effective length of database: 1037
Effective search space: 660569
Effective search space used: 660569
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
