XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGC
GGAATTCTCTTTATTCTCTGTGCCCCATACTTTAATGGGGTTATTTGATT
TTCTGGAGTCCACCTTCTTGATTTCTTTGTGTATATTGGATATTAGTCAC
CTATTGCATTTAGGACTGGCAAAAATCCTTTCCCAATCCAATTGGTGTCC
TTTTTGTCTTATTGACAGTGGTGGAGAGTGTTTTGAAAGCATAATTTTAT
TGAGGTTATAGAGATATCTCAGTAAAGTGCCTGCCTTGAAAGCATGAGGA
CCTGGGCCTGAATCTACATAGAGAAAAAGGCACAATTTCAGCACTGCATA
GGCAGAGATATATTTCTGGAACTCACTGGCCAGTCAGCTTAGCCAAATCA
GTGTGTTCCAGGTTGACGAACGACCTGGAACCAAAACCAAAACTAAAAAT
TAAGGTGGGTAGCAACTAAGGAATGACAGTTGAAGTTTTTGGTCTCTGAA
CATGCAAGGGCACGCACATATACTTAAACATACATGCTTATCAATATGCA
AACACACATATATACCCAAAAACAAACAAATAAACAAACCAACCAATTAA
AATCAAAAAGCAAAAAGAAGAAAGGGATTTATTTTATAGTAGCTTTCTGT
TGCTCTTGGAGCATCTTTTGACCAAGCATGTGTGCCTTAGAATGGTGAAA
CACAGCATGTGAATTTAGGGCCTAGATTTAATAAGCTTCACTTTCTCA

NTTCAATGATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXTGGGTTTTGTGACTTGGAGACAGA
AGGATCCTGGAATCTGACTGGCCAGCCAGCCCCACTGACTTAATGAGATA
CAGGTCAGTGAAAGACCCTGCCTCAATAAACAAGACGAAGGCAGGCATGG
TGGGGGACCATCTTTGAATCCAGCACTTGGGAGGCTGATACAAGAACATC
TCTGTAAGTTCAAGGCCATTCTACTCCACATAGTAAATTCCAGATCAGCC
ATGGAAACATAGTGAGGCCCAGTTTCAAAGAAAAACAAAACAAGGGGAAC
ATATCTGAGGAATGACAGAATGACAGTCAAGGTAGTTCTCTGGCCTACAC
ACACACACACACACACACACACACACTCACACACACACACACACACACAC
ACACAAAATCACTTCTGAAGACACTCTAAAGAATATGAAGGTAACAACAC
AGGGAAGTCTGACAAAGAAGCTTCTATACACTACAGCCCTTTTCCTTGCA
GAAAGAAGATACCCTCTTGCTCTTTTTATCCACATTGAGCAGTGCACTGG
TTGTCACATGAGCTGAGACCCACGCCTGTTTCACGGTCAAAAGAGCTACA
TAGTCACTCCAACAACCTTGCATAAAGGGTCCTGCATTTGACAAATGTTT
TGTTTTTCCCATCTAGAAAATTCATATTCCCTTCCTCTCCCTCTTTCTCT
CACTCTCTCTCTTCCCCTT

Query= MSMg01no531_h08.g1 MSMg01no531_h08.g1 CHROMAT_FILE:
MSMg01no531_h08.g1 PHD_FILE: MSMg01no531_h08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:08:05 2005
         (539 letters)



>mm_chr1_126999743_127000681
          Length = 939

 Score =  891 bits (461), Expect = 0.0
 Identities = 506/539 (93%), Gaps = 28/539 (5%)
 Strand = Plus / Plus

                                                                       
Query: 1   tgggttttgtgacttggagacagaaggatcctggaatctgactggccagccagccccact 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 229 tgggttttgtgacttggagacagaaggatcctggaatctgactggccagccagccccact 288

                                                                       
Query: 61  gacttaatgagatacaggtcagtgaaagaccctgcctcaataaacaagacgaaggcaggc 120
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 gacttaatgaaatacaggtcagtgaaagaccctgcctcaataaacaagacgaaggcaggc 348

                                                                       
Query: 121 atggtgggggaccatctttgaatccagcacttgggaggctgatacaagaacatctctgta 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 atggtgggggaccatctttgaatccagcacttgggaggctgatacaagaacatctctgta 408

                                                                       
Query: 181 agttcaaggccattctactccacatagtaaattccagatcagccatggaaacatagtgag 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 agttcaaggccattctactccacatagtaaattccagatcagccatggaaacatagtgag 468

                                                                       
Query: 241 gcccagtttcaaagaaaaacaaaacaaggggaacatatctgaggaatgacagaatgacag 300
           |||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||
Sbjct: 469 gcccagtttcaaagaaaaacaaaacaaggggaacctgtctgaggaatgacagaatgacag 528

                                                                       
Query: 301 tcaaggtagttctctggcctacacacacacacacacacacacacacacactcacacacac 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||          
Sbjct: 529 tcaaggtagttctctggcctacacacacacacacacacacacacacacac---------- 578

                                                                       
Query: 361 acacacacacacacacacaaaatcacttctgaagacactctaaagaatatgaaggtaaca 420
                             ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 579 ------------------aaaatcacttctgaagacactctaaagaatatgaaggtaaca 620

                                                                       
Query: 421 acacagggaagtctgacaaagaagcttctatacactacagcccttttccttgcagaaaga 480
           |||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 621 acacagggaagtctcacaaagaagcttctatacactacagcccatttccttgcagaaaga 680

                                                                      
Query: 481 agataccctcttgctctttttatccacattgagcagtgcactggttgtcacatgagctg 539
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 agataccctcttgctctttttatccacattgagcagtgcactggttgtcacatgagctg 739


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 90
Number of extensions: 5
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 539
Length of database: 939
Length adjustment: 10
Effective length of query: 529
Effective length of database: 929
Effective search space:   491441
Effective search space used:   491441
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)