CCTTTTTAGTTCCATAATTTGGGGCCGCTAAACGAGTAACTATTTTCCAG
AGGATCCGCGTGATTCAGCATTTTCTACTGGAAGCTCAACAAGAAAATGC
AAAAAAACAAAAAAATAACAAATAGATTTTTGAAAGACTCTTTTGTCAGG
ATAATCCGTGCTACCGTATACTCTTGAATTGCCTATTTCTCGATTTACTA
TTATTGCAAGATGATGTATGGATATGTGATTGTCCTCCTCATATAATGAA
TGGTCATGAGTTTTTGAAAATGAACCCATTATTTTTGTGATCGTCATCAT
GCATACCCATAGCCAGCGCTTACATAAGACTGTGTCAACGACAAAAAGGG
ACAATAGAGAACCTAAGCAGTAATTCATTGCCTGATAGTCACGCCTCCAC
ATGCTTGCTCACCATTCCTATGACAGTGTCACCAAAGCAAGCCATGTGAT
ACACTATGGGAAAACATTCCTTCATTGAGCGATTCTATTGAAAGAGGCTT
CACACATACATTATACGTGGCATAATCAGCAGGCTTATCCCATATGACTA
TCACTCCTCTTTGTGCTACATTTTCTCCCTGTATTGGTTCTTGACCCTTT
TCTACCCCCCTTTGTCCCTTCACGTCTTATCCCTCATTCCCTACAAACAA
CCCTAACGGCCGGGGCCTTATATCAATTGGCCTTTTTATGTATCGTCCAC
CCCTCCTGTTCCACTTTTTCCCACGTTACTTATTTT

NCCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXCAAGATTTCAGGTTCTCTAGC
TTGCTGAAGATGTTGTTGGTGGAGATCTTAAATAAGAAGTTCACTGAGAA
TACTTTACAATGTCTACAAACTTGGGCATCCTTCTTAAGCAAAGGCTTAG
ACTACCTAAAAAGAAAGTCATCACGGTAGTTCACATACCAGTAACTTGAA
ATCAGATACACGGCAGTTTTAGCTACATCATCAGTAGCACCACCTGAAGC
CTCCTTAATTATTATTACGTTAAATTTAAAAGTTCCAAATGCTCTAAATA
TATGCAAACTGTTAGACTCTCAGAATGTTTATGAAACTAAATTAGCCTCA
TGAACATAATAATTTAAAGCTAGAGGTGAATGTCAGAGAAGACGATTCTG
TTTTCTATGTGTTTTCCTTTTTAATTATCTGCCTGGGCTACCAAGCCTTA
GCACTCCTAAAGAGAAGCAAAAGGCTTGATTTAAAACTCACCTAAGAAAA
TGTACATTCTACATCATTCTAACTAAAGGGTCTTGCATTGTTTCCTTGGG
CTGAATCAAAGGGCTTTGTCCTATAACATATAAACGGAAGTTATGGGGTA
GAGGTAATTAATTATGTACACTCCTGTGGTTACGGCTCATGTTGTGAACA
GCTTCAACATATTGACTTTATGTGGTGCATTCAAACTTCTGCTGC

Query= MSMg01no533_g10.g1 MSMg01no533_g10.g1 CHROMAT_FILE:
MSMg01no533_g10.g1 PHD_FILE: MSMg01no533_g10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:10:36 2005
         (664 letters)



>mm_chr1_140101037_140102100
          Length = 1064

 Score = 1253 bits (648), Expect = 0.0
 Identities = 660/664 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   agatttcaggttctctagcttgctgaagatgttgttggtggagatcttaaataagaagtt 60
           |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 864 agatttcaggttctctagcttgctgaagatgttggtggtggagatcttaaataagaagtt 805

                                                                       
Query: 61  cactgagaatactttacaatgtctacaaacttgggcatccttcttaagcaaaggcttaga 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 cactgagaatactttacaatgtctacaaacttgggcatccttcttaagcaaaggcttaga 745

                                                                       
Query: 121 ctacctaaaaagaaagtcatcacggtagttcacataccagtaacttgaaatcagatacac 180
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 744 ctacctaaaaagaaagtcatcacggtagttcacatacgagtaacttgaaatcagatacac 685

                                                                       
Query: 181 ggcagttttagctacatcatcagtagcaccacctgaagcctccttaattattattacgtt 240
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 684 ggcagttttagctacatcatcagtagcgccacctgaagcctccttaattattattacgtt 625

                                                                       
Query: 241 aaatttaaaagttccaaatgctctaaatatatgcaaactgttagactctcagaatgttta 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 aaatttaaaagttccaaatgctctaaatatatgcaaactgttagactctcagaatgttta 565

                                                                       
Query: 301 tgaaactaaattagcctcatgaacataataatttaaagctagaggtgaatgtcagagaag 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 tgaaactaaattagcctcatgaacataataatttaaagctagaggtgaatgtcagagaag 505

                                                                       
Query: 361 acgattctgttttctatgtgttttcctttttaattatctgcctgggctaccaagccttag 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 acgattctgttttctatgtgttttcctttttaattatctgcctgggctaccaagccttag 445

                                                                       
Query: 421 cactcctaaagagaagcaaaaggcttgatttaaaactcacctaagaaaatgtacattcta 480
           | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 cgctcctaaagagaagcaaaaggcttgatttaaaactcacctaagaaaatgtacattcta 385

                                                                       
Query: 481 catcattctaactaaagggtcttgcattgtttccttgggctgaatcaaagggctttgtcc 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 catcattctaactaaagggtcttgcattgtttccttgggctgaatcaaagggctttgtcc 325

                                                                       
Query: 541 tataacatataaacggaagttatggggtagaggtaattaattatgtacactcctgtggtt 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tataacatataaacggaagttatggggtagaggtaattaattatgtacactcctgtggtt 265

                                                                       
Query: 601 acggctcatgttgtgaacagcttcaacatattgactttatgtggtgcattcaaacttctg 660
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 acggctcatgttgtgaacagcttcaacatattgactttatgtggtgcattcaaacttctg 205

               
Query: 661 ctgc 664
           ||||
Sbjct: 204 ctgc 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 664
Length of database: 1064
Length adjustment: 10
Effective length of query: 654
Effective length of database: 1054
Effective search space:   689316
Effective search space used:   689316
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)