Query= MSMg01no537_b17.b1 MSMg01no537_b17.b1 CHROMAT_FILE:
MSMg01no537_b17.b1 PHD_FILE: MSMg01no537_b17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:15:23 2005
(644 letters)
>mm_chr1_101042330_101043373
Length = 1044
Score = 1156 bits (598), Expect = 0.0
Identities = 629/640 (98%), Gaps = 2/640 (0%)
Strand = Plus / Plus
Query: 5 gaattccatactgtctgttcatgatgaggacttaaacagcaaactggaccttggttttgt 64
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 205 gaattccatactgtctgttcatgatgaggacttaaacagcaaactggaccttgattttgt 264
Query: 65 cgaagaatacattagctattgaaggctaccaaataagaaattcgagctgttcacaggaaa 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 cgaagaatacattagctattgaaggctaccaaataagaaattcgagctgttcacaggaaa 324
Query: 125 tatgaagaaattgatttgtacattgtctaagattcatatgtgaactttacagaatgcttt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 325 tatgaagaaattgatttgtacattgtctaagattcatatgtgaactttacagaattcttt 384
Query: 185 ctatgtctgccttaagccacagtgtcttttgtttccatgactgcaggccaaatttcattt 244
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ctatgtctaccttaagccacagtgtcttttgtttccatgactgcaggccaaatttcattt 444
Query: 245 ctttgtttagaagtctccttgaattcacatttatggccatattttataggacttcagatg 304
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 445 ctttgtttagaagtctccttgaattcacatttatggccatattttaaaggacttcagatg 504
Query: 305 attacaagcagatgtgttttactccatgctaaactaaattataactatcgcacaaactcc 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 attacaagcagatgtgttttactccatgctaaactaaattataactatcgcacaaactcc 564
Query: 365 tatcatgaagattatggtggtttgaacaggaatggtgatttttttttgttaattcttgac 424
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 565 catcatgaagattatggcggtttgaacaggaatggtgatttttttttgttaattcttaac 624
Query: 425 tcaaagtgagtggaactactaggatgcgtagccatgtttgagtaggtgtggccttgttgg 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 tcaaagtgagtggaactactaggatgcgtagccatgtttgagtaggtgtggccttgttgg 684
Query: 485 acaagagtggtagtgtgaagttggtctttgaggtcttataatctccagtctatcatagtc 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 685 acaagagtggtagtgtgaagttggtctttgaggtcttataatctccagtctatca--gtc 742
Query: 545 ttccttctgataccagagaatgtaaaactcccagttatctctccaacactgggtcagctt 604
|||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 ttccttctgatacctgaggatgtaaaactcccagttatctctccaacactgggtcagctt 802
Query: 605 gcatgcagacatgtttctcccatgatgataaacatctgaa 644
||||||||||||||||||||||||||||||||||||||||
Sbjct: 803 gcatgcagacatgtttctcccatgatgataaacatctgaa 842
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 644
Length of database: 1044
Length adjustment: 10
Effective length of query: 634
Effective length of database: 1034
Effective search space: 655556
Effective search space used: 655556
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no537_b17.g1 MSMg01no537_b17.g1 CHROMAT_FILE:
MSMg01no537_b17.g1 PHD_FILE: MSMg01no537_b17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:15:24 2005
(595 letters)
>mm_chr1_101130478_101131472
Length = 995
Score = 1104 bits (571), Expect = 0.0
Identities = 589/595 (98%)
Strand = Plus / Minus
Query: 1 ttaaacattgttacattagtaaagatggaaccagtctgagagctggtatctccttcagca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 795 ttaaacattgttacattagtaaagatggaaccagtctgagagctggtatctccttcagca 736
Query: 61 tgtgtgtttacacatcacttgccttcaatactgtagttcgatgagtgagttcctttaaag 120
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 735 tatgtgtttacacatcacttgccttcaatactgtagttcgatgagtgagttcctttaaag 676
Query: 121 attttctaaagctgtattcacacagtgagattatgagtggctttcaggtgtgaagagatc 180
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 675 attttctaaagctgtattcacacagtgagattatgagtggctttcaggtgtgtagagatc 616
Query: 181 aacaatgttgctacccactgagctcaactgagctcaactgtacatcaataaacagcaaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 aacaatgttgctacccactgagctcaactgagctcaactgtacatcaataaacagcaaaa 556
Query: 241 tcttagagcagccctgtcctaaagaccaccaagcacacagaagagagctagcatagaatt 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 555 tcttagagcagccctgtcctaaagaccaccaagcacacagaagagagctagcataggatt 496
Query: 301 gcgaggtttgggggaggaatggtatttgatatggagacaaagatggttcatattctatgg 360
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 gcgaggtttggcggaggaatggtatttgatatggagacaaagatggttcatattctatgg 436
Query: 361 aagtgttttattacgttaacaagtagcatcacctgagagaaccgaaggaaagtttcaaca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 aagtgttttattacgttaacaagtagcatcacctgagagaaccgaaggaaagtttcaaca 376
Query: 421 gcacacatagaataaattttgcacttgaaaacattcattgtgagaatccttggaacagct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 gcacacatagaataaattttgcacttgaaaacattcattgtgagaatccttggaacagct 316
Query: 481 attttctgtggtgccatgtggaaatggtcccaaggttacttggcacacctaatgggactt 540
|||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||
Sbjct: 315 attttctgtggtgccatgtggaaatggtcccaaggtaacttggcacacctaataggactt 256
Query: 541 agagacactgcttttctttatttcaaagtgaaacttttgtttgagaaattccaag 595
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 agagacactgcttttctttatttcaaagtgaaacttttgtttgagaaattccaag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 595
Length of database: 995
Length adjustment: 10
Effective length of query: 585
Effective length of database: 985
Effective search space: 576225
Effective search space used: 576225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
