Query= MSMg01no537_h21.b1 MSMg01no537_h21.b1 CHROMAT_FILE:
MSMg01no537_h21.b1 PHD_FILE: MSMg01no537_h21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:15:52 2005
(639 letters)
>mm_chr1_133308743_133309781
Length = 1039
Score = 791 bits (409), Expect = 0.0
Identities = 427/433 (98%)
Strand = Plus / Minus
Query: 5 gaattccaggacagccagggctatacagagaaaccctttcaaacaaaacaaaaacaaaaa 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 gaattccaggacagccagggctatacagagaaaccctttcaaacaaaacaaaaacaaaaa 374
Query: 65 acaaaacaagagttcaaaaatgtccctgtcttcctctcccatgtctctttttcctcttct 124
||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||
Sbjct: 373 acaaaacaagagttcaaaaatgttcctgtcttcctctcccatgtctcttttccctcttct 314
Query: 125 tgttctttaccccattttagagtttttcaaaaaagaaaaaaatatagtgatgtaggtgtg 184
||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||
Sbjct: 313 tgttctttaccccatttaagagtttttcaaaaaataaaaaaatatagtgatgtaggtgtg 254
Query: 185 ctagtttcttactacattgctatggtcaaacaatgacaagaagcaacagacaggaaatat 244
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 253 ctagtttcttactacattgctatggtcagacaatgacaagaagcaacagacaggaaatat 194
Query: 245 ttacttaactcatggttattgtagggctcatcatgccaggggatgcatgcaggtgctgct 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 ttacttaactcatggttattgtagggctcatcatgccaggggatgcatgcaggtgctgct 134
Query: 305 tggttgtgggagcatgagcttgctgttggctctcatctcagagagagggtacaaagtata 364
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 133 tggttgtgggagcatgagcttgctgttggctctcatctcagagagagggtataaagtata 74
Query: 365 atagcctgtagaccttaaggctcattcccacagtgacccacttcctcctgctaaacccaa 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 73 atagcctgtagaccttaaggctcattcccacagtgacccacttcctcctgctaaacccaa 14
Query: 425 cctcccaaaatag 437
|||||||||||||
Sbjct: 13 cctcccaaaatag 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 639
Length of database: 1039
Length adjustment: 10
Effective length of query: 629
Effective length of database: 1029
Effective search space: 647241
Effective search space used: 647241
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no537_h21.g1 MSMg01no537_h21.g1 CHROMAT_FILE:
MSMg01no537_h21.g1 PHD_FILE: MSMg01no537_h21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:15:52 2005
(665 letters)
>mm_chr1_133282599_133283663
Length = 1065
Score = 1272 bits (658), Expect = 0.0
Identities = 664/666 (99%), Gaps = 1/666 (0%)
Strand = Plus / Plus
Query: 1 tagttgtcaatagaggaggacttgatcacagagggtagcaccacgtttttggtgggtgat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tagttgtcaatagaggaggacttgatcacagagggtagcaccacgtttttggtgggtgat 260
Query: 61 ggtatgtactgtcatgtgtcttaattttggtcagttcaaagctgcacttttcaagaatac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggtatgtactgtcatgtgtcttaattttggtcagttcaaagctgcacttttcaagaatac 320
Query: 121 tccacattctttcctgaatatccaaccttctctgagatcatttccattccatttaaatat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tccacattctttcctgaatatccaaccttctctgagatcatttccattccatttaaatat 380
Query: 181 tatttagagtcaaggatggtggcacaggcttgtaatcccaacatttctcagtggctaagg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tatttagagtcaaggatggtggcacaggcttgtaatcccaacatttctcagtggctaagg 440
Query: 241 caggagggaagtccaaagctagccttggctacatagcatgaacataagtttttattattt 300
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 441 caggagggaagtccaaagctagctttggctacatagcatgaacataagtttttattattt 500
Query: 301 ctttcagtgtaggtctgctggtgataggtttttcatatcttcttatttggaaatctcatt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ctttcagtgtaggtctgctggtgataggtttttcatatcttcttatttggaaatctcatt 560
Query: 361 agttggccttcacttcttaaggatacgtctttctactgcctcctatctttcattgttttc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 agttggccttcacttcttaaggatacgtctttctactgcctcctatctttcattgttttc 620
Query: 421 tattgagaacctaacagttaactttgttgttgcttctttgagtgcagctgtaagacactt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tattgagaacctaacagttaactttgttgttgcttctttgagtgcagctgtaagacactt 680
Query: 481 ctctaacagctttcatcaatgtaaccataattcacctacacacaactttctttgtattca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ctctaacagctttcatcaatgtaaccataattcacctacacacaactttctttgtattca 740
Query: 541 tcctacctggagttcataatgtgtttttactctgtaataacttcattagttgtagacagt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tcctacctggagttcataatgtgtttttactctgtaataacttcattagttgtagacagt 800
Query: 601 ttatagccatttttcttcaactaatgctttcttcattcttttttttttt-ctgctggaac 659
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 801 ttatagccatttttcttcaactaatgctttcttcattcttttttttttttctgctggaac 860
Query: 660 ttcaaa 665
||||||
Sbjct: 861 ttcaaa 866
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 665
Length of database: 1065
Length adjustment: 10
Effective length of query: 655
Effective length of database: 1055
Effective search space: 691025
Effective search space used: 691025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
