Query= MSMg01no539_i02.b1 MSMg01no539_i02.b1 CHROMAT_FILE:
MSMg01no539_i02.b1 PHD_FILE: MSMg01no539_i02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:18:29 2005
(361 letters)
>mm_chr1_173152953_173153713
Length = 761
Score = 661 bits (342), Expect = 0.0
Identities = 357/364 (98%), Gaps = 7/364 (1%)
Strand = Plus / Plus
Query: 1 aattcacagg--tttttgccttcccggcgtggtggcgcaggcggatttctaagttcgagg 58
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 aattcacaggcc---ttgccttcccggcgtggtggcgcaggcggatttctaagttcgagg 258
Query: 59 ccagcctggtctacaaagtgagttccaggacagccagggctatacagagaaaccctgtct 118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 ccagcctggtctacaaagtgagttccaggacagccagggctatacagagaaaccctgtct 318
Query: 119 caacga-ccccccccccccaaaaaaaatgactgtgagagttctgagggcgaggagagagt 177
|||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 caacgacccccccccccc-aaaaaaaatgactgtgagagttctgagggcgaggagagagt 377
Query: 178 tgtgggcagaactagcttccgaagcagctaccctctctagttattatttacatggagaaa 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 tgtgggcagaactagcttccgaagcagctaccctctctagttattatttacatggagaaa 437
Query: 238 agacaaataaaatctaagaatacaaccgcagcctgaagttacgctcctccccccagggcc 297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 agacaaataaaatctaagaatacaaccgcagcctgaagttacgctcctccccccagggcc 497
Query: 298 aggggcaagcagtgatgtgacactagaggtaagtccacaagaggacaactggaaatatgc 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 aggggcaagcagtgatgtgacactagaggtaagtccacaagaggacaactggaaatatgc 557
Query: 358 aaga 361
||||
Sbjct: 558 aaga 561
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 361
Length of database: 761
Length adjustment: 9
Effective length of query: 352
Effective length of database: 752
Effective search space: 264704
Effective search space used: 264704
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no539_i02.g1 MSMg01no539_i02.g1 CHROMAT_FILE:
MSMg01no539_i02.g1 PHD_FILE: MSMg01no539_i02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:18:29 2005
(194 letters)
>mm_chr1_173303758_173304351
Length = 594
Score = 354 bits (183), Expect = e-102
Identities = 189/191 (98%)
Strand = Plus / Minus
Query: 1 cacccccctgaattcagaccacccccctcctccaacgtggccagctctgtctcatgccac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 cacccccctgaattcagaccacccccctcctccaacgtggccagctctgtctcatgccac 332
Query: 61 atcccagcctcaacttgagctttcagaacagttttagagacgtggggggaggggcgcaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 atcccagcctcaacttgagctttcagaacagttttagagacgtggggggaggggcgcaga 272
Query: 121 aagccctgggaacggctcctcgggcagcaggtaccatgcttgtttctgttttattgggag 180
|||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||
Sbjct: 271 aagccctgggaacggctcctcgggcagcaggtaccatgcttgtttctgttctagtgggag 212
Query: 181 tgcagtactcc 191
|||||||||||
Sbjct: 211 tgcagtactcc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 194
Length of database: 594
Length adjustment: 8
Effective length of query: 186
Effective length of database: 586
Effective search space: 108996
Effective search space used: 108996
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
