Query= MSMg01no541_f14.b1 MSMg01no541_f14.b1 CHROMAT_FILE:
MSMg01no541_f14.b1 PHD_FILE: MSMg01no541_f14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:20:57 2005
(645 letters)
>mm_chr1_131795412_131796456
Length = 1045
Score = 895 bits (463), Expect = 0.0
Identities = 469/471 (99%), Gaps = 1/471 (0%)
Strand = Plus / Minus
Query: 5 gaatt-cacaggatctgatattaatagtcttagtatcttctgatctacaaaatatctttc 63
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 812 gaattccacaggatctgatattaatagtcttagtatcttctgatctacaaaatatctttc 753
Query: 64 cccatggatgttaacatattgtcgtgttcccaggggtatgaattagatttcatgggagcc 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 752 cccatggatgttaacatattgtcgtgttcccaggggtatgaattagatttcatgggagcc 693
Query: 124 aatattcagcctaccacactgggtattaccttgcctataagaatgagaacaaagccaaca 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 692 aatattcagcctaccacactgggtattaccttgcctataagaatgagaacaaagccaaca 633
Query: 184 tcacctacttctaatagccagataaagaccagacaaatctctgaggtttactgtagcttt 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 632 tcacctacttctaatagccagataaagaccagacaaatctctgaggtttactgtagcttt 573
Query: 244 tcatatttcctgcttttacaatacctatttttttacaataattcatattgcttttttata 303
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 ccatatttcctgcttttacaatacctatttttttacaataattcatattgcttttttata 513
Query: 304 cctaccctaccttagaactatctccaaatatgcatctgcgatctccttcaggggaccaaa 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 cctaccctaccttagaactatctccaaatatgcatctgcgatctccttcaggggaccaaa 453
Query: 364 ctgacttacttattactatagatgaaatataattaagcatgtacatctgcactaaacaaa 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 ctgacttacttattactatagatgaaatataattaagcatgtacatctgcactaaacaaa 393
Query: 424 aatacattccaacaacaaatgcaattatttgaattatgaaaaatgtaaatc 474
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 aatacattccaacaacaaatgcaattatttgaattatgaaaaatgtaaatc 342
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 645
Length of database: 1045
Length adjustment: 10
Effective length of query: 635
Effective length of database: 1035
Effective search space: 657225
Effective search space used: 657225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no541_f14.g1 MSMg01no541_f14.g1 CHROMAT_FILE:
MSMg01no541_f14.g1 PHD_FILE: MSMg01no541_f14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:20:57 2005
(601 letters)
>mm_chr1_131661748_131662748
Length = 1001
Score = 1139 bits (589), Expect = 0.0
Identities = 598/601 (99%)
Strand = Plus / Plus
Query: 1 ctatcttcctgggttttgaggctgtgctttcaatgtgaaaatgactgaagaacttagaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctatcttcctgggttttgaggctgtgctttcaatgtgaaaatgactgaagaacttagaaa 260
Query: 61 atatcccctcaaattgtttcaccttctggctccaatgacatgggatagtaagtgactcac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atatcccctcaaattgtttcaccttctggctccaatgacatgggatagtaagtgactcac 320
Query: 121 ttgtagttttaacttatactgagctaaagacctggcacttttaataaataaggcagaatt 180
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttgtagtttcaacttatactgagctaaagacctggcacttttaataaataaggcagaatt 380
Query: 181 ctctcatcaagacaatcagagctggcagtatgccacaggtactatctgtagaactcacag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctctcatcaagacaatcagagctggcagtatgccacaggtactatctgtagaactcacag 440
Query: 241 acctaagttccaacataaacagtacggagactcttgatgtgggtcaggcactgaaatggt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 acctaagttccaacataaacagtacggagactcttgatgtgggtcaggcactgaaatggt 500
Query: 301 gcagaaaatcaaacttgtagtttgcacaggcagaagacacaaaggctgttggttgacaag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gcagaaaatcaaacttgtagtttgcacaggcagaagacacaaaggctgttggttgacaag 560
Query: 361 gatgatattctgaggctctgatagaaaatttatgaaaattggaagtgtgatcaagtgtga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gatgatattctgaggctctgatagaaaatttatgaaaattggaagtgtgatcaagtgtga 620
Query: 421 agtcttatacaacacgctcataaataaaggaagttgtgctctggaggaaagggtaaaacc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 agtcttatacaacacgctcataaataaaggaagttgtgctctggaggaaagggtaaaacc 680
Query: 481 ttctggaagaagaaattaaaaaaacacaatttcatgggcaagagaatagttgattctatg 540
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ttctggaagaagaaattaaagaaacacaatttcatgggcaagagaatagttgattctatg 740
Query: 541 ggccagaaagtgggcaccctttcaggataagtcttagcttccctatttcacaaaacacta 600
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 741 ggccagaaagtgggcaccctttcaggataagtcttagcttccctattccacaaaacacta 800
Query: 601 g 601
|
Sbjct: 801 g 801
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 601
Length of database: 1001
Length adjustment: 10
Effective length of query: 591
Effective length of database: 991
Effective search space: 585681
Effective search space used: 585681
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
