Query= MSMg01no541_g06.b1 MSMg01no541_g06.b1 CHROMAT_FILE:
MSMg01no541_g06.b1 PHD_FILE: MSMg01no541_g06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:21:01 2005
(599 letters)
>mm_chr1_135794382_135795379
Length = 998
Score = 1120 bits (579), Expect = 0.0
Identities = 594/599 (99%), Gaps = 1/599 (0%)
Strand = Plus / Minus
Query: 1 aaagtaggactgtggagaaggaagggagacagagacagacagacatacaggcagagacaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 798 aaagtaggactgtggagaaggaagggagacagagacagacagacatacaggcagagacaa 739
Query: 61 ctctaccccaccaattggaccacctgatgctggcctactggggcacttcttcgtgccaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 738 ctctaccccaccaattggaccacctgatgctggcctactggggcacttcttcgtgccaag 679
Query: 121 agcttgacatgacccacgggtctcccattctttatgtccctataggcgctgaagaagctg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 678 agcttgacatgacccacgggtctcccattctttatgtccctataggcgctgaagaagctg 619
Query: 181 cagtttctctacctggccaacaacatgctggattccatccctgggcctttgcccctcagc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 cagtttctctacctggccaacaacatgctggattccatccctgggcctttgcccctcagc 559
Query: 241 ctgcgctctctgcacctgcaggtgagcagccttaaccagaccaaagataaaaatatagtg 300
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 558 ctgcgctctctgcacctgcaggtgagcagccttaaccagaccaaggataaaaatatagtg 499
Query: 301 tgtgcagtcggtcaaaggcagataacaggggaatgcagaacgtggccatggaagtgatgt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 tgtgcagtcggtcaaaggcagataacaggggaatgcagaacgtggccatggaagtgatgt 439
Query: 361 tttccactcctttttaaaacatcacctccccttacctattggtatttcacctgccttagg 420
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 438 tctccactcctttttaaaacatcacctccccttacctattggtatttcacctgcctta-g 380
Query: 421 ggccctgctttgcctacctcccgtctcatctcatcccattagggcctccccacttccctc 480
||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 379 ggccctgctatgcctacctcccgtctcatctcatcccgttagggcctccccacttccctc 320
Query: 481 cttctactcttatcttttctaatttctttactctctcttcactctccacaagtatcctct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 cttctactcttatcttttctaatttctttactctctcttcactctccacaagtatcctct 260
Query: 541 tcttgccctgtgtggcctcagctccacctactttagcttcttctccagctgcacaggag 599
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 tcttgccctgtgtggcctcagctccacctactttagcttcttctccagctgcacaggag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 599
Length of database: 998
Length adjustment: 10
Effective length of query: 589
Effective length of database: 988
Effective search space: 581932
Effective search space used: 581932
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no541_g06.g1 MSMg01no541_g06.g1 CHROMAT_FILE:
MSMg01no541_g06.g1 PHD_FILE: MSMg01no541_g06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:21:01 2005
(568 letters)
>mm_chr1_135613933_135614900
Length = 968
Score = 1075 bits (556), Expect = 0.0
Identities = 565/568 (99%)
Strand = Plus / Plus
Query: 1 tctaagtcatacttgcaggggacatgctcccttgccttggagcacctgagtgggctcagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctaagtcatacttgcaggggacatgctcccttgccttggagcacctgagtgggctcagt 260
Query: 61 tctaaaaacgaggtacccaggaaagccaactgagacccccaaggtgtttactcttagcct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tctaaaaacgaggtacccaggaaagccaactgagacccccaaggtgtttactcttagcct 320
Query: 121 tggtcctcgtaactccctctcctaatcttgggcacctagagagagtcctagctcccaagc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tggtcctcgtaactccctctcctaatcttgggcacctagagagagtcctagctcccaagc 380
Query: 181 tcctgccctctgtctcccagcacccctatcccaagcccagacagaatcttacctggcaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tcctgccctctgtctcccagcacccctatcccaagcccagacagaatcttacctggcaga 440
Query: 241 agaatgtgcccaaaactacagtgcagaaaatgatgttgcggtagacgcctgcaaacacgt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agaatgtgcccaaaactacagtgcagaaaatgatgttgcggtagacgcctgcaaacacgt 500
Query: 301 tcttctcaccgtggatcttccgagcgttgatttcgttgaagagttgcatcagcacaaacg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tcttctcaccgtggatcttccgagcgttgatttcgttgaagagttgcatcagcacaaacg 560
Query: 361 tgttgaaaacaatggtgtagtgctggctgggtggcgaattgagaggtgccttcctcccac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tgttgaaaacaatggtgtagtgctggctgggtggcgaattgagaggtgccttcctcccac 620
Query: 421 tgtcaatgtcgaacagtctgtcgcctggtagggcagggcaattattagaggatgactgtg 480
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tgtcaatgtcgaacagtgtgtcgcctggtagggcagggcaattattagaggatgactgtg 680
Query: 481 gtctcagtgagggttcaggttgagacagaatagccgtcctgacggcttatggccattaca 540
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 681 gtctcagtgagggttcaggttgagacagaatagccgtcctgaccgcttatggccattaca 740
Query: 541 aagaccattctaactgggccatttctga 568
||||||| ||||||||||||||||||||
Sbjct: 741 aagaccactctaactgggccatttctga 768
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 568
Length of database: 968
Length adjustment: 10
Effective length of query: 558
Effective length of database: 958
Effective search space: 534564
Effective search space used: 534564
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
