Query= MSMg01no541_l21.b1 MSMg01no541_l21.b1 CHROMAT_FILE:
MSMg01no541_l21.b1 PHD_FILE: MSMg01no541_l21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:21:31 2005
(583 letters)
>mm_chr1_73292622_73293605
Length = 984
Score = 1114 bits (576), Expect = 0.0
Identities = 579/580 (99%), Gaps = 1/580 (0%)
Strand = Plus / Plus
Query: 5 gaattctttcaatcttccagtctctgaatttggtatagtccctaggagtctgtctggagg 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctttcaatcttccagtctctgaatttggtatagtccctaggagtctgtctggagg 264
Query: 65 caaattctggttctgccactaaatagcttagtgatcattaagtatgcactttccttgaga 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 caaattctggttctgccactaaatagcttagtgatcattaagtatgcactttccttgaga 324
Query: 125 taactttattcatgaaatgggcataccaatcacctctctttcagatgaggtgagttacca 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 taactttattcatgaaatgggcataccaatcacctctctttcagatgaggtgagttacca 384
Query: 185 caggtaaagtagggctatgcatcagtgaggtttttagtgaattctatctatatgcaccct 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 caggtaaagtagggctatgcatcagtgaggtttttagtgaattctatctatatgcaccct 444
Query: 245 tccctttcccttcctaatttattgagaagggcctggctctggttttcatgaagcattttt 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tccctttcccttcctaatttattgagaagggcctggctctggttttcatgaagcattttt 504
Query: 305 aaggatgtcaaaacacagagtggcctatatgtcttactgggaaagacccttcctctacag 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 aaggatgtcaaaacacagagtggcctatatgtcttactgggaaagacccttcctctacag 564
Query: 365 ccttttt-cccagcctcatgtctgctcctgccttgatatcactcacctgtatgcttctgt 423
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 ccttttttcccagcctcatgtctgctcctgccttgatatcactcacctgtatgcttctgt 624
Query: 424 gctacatcagggaaatacatgcaagctgacactgctctgggttttgagagattcccatag 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 gctacatcagggaaatacatgcaagctgacactgctctgggttttgagagattcccatag 684
Query: 484 gacatagaggaaaggtaggtttacacattgttttaggaggtttcatgaccaattatccaa 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 gacatagaggaaaggtaggtttacacattgttttaggaggtttcatgaccaattatccaa 744
Query: 544 aacggagtgattaaaagcaatagaaagggaggctggagag 583
||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 aacggagtgattaaaagcaatagaaagggaggctggagag 784
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 583
Length of database: 984
Length adjustment: 10
Effective length of query: 573
Effective length of database: 974
Effective search space: 558102
Effective search space used: 558102
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no541_l21.g1 MSMg01no541_l21.g1 CHROMAT_FILE:
MSMg01no541_l21.g1 PHD_FILE: MSMg01no541_l21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:21:31 2005
(517 letters)
>mm_chr1_73442956_73443872
Length = 917
Score = 998 bits (516), Expect = 0.0
Identities = 516/516 (100%)
Strand = Plus / Minus
Query: 1 caggtagcatagcagcttggagcataggtacttgtaccatctggttagtaactgccattt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 652 caggtagcatagcagcttggagcataggtacttgtaccatctggttagtaactgccattt 593
Query: 61 gaaggagtttgcaacacagtatgtccaattgcctcactgtacccaggtctatcctagttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592 gaaggagtttgcaacacagtatgtccaattgcctcactgtacccaggtctatcctagttt 533
Query: 121 cctggggcacatacttatcttacaagtggaaatagaacagaaaacatatacataggctat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 532 cctggggcacatacttatcttacaagtggaaatagaacagaaaacatatacataggctat 473
Query: 181 tgtgatttgaatgtgaaatgatgcacagatgttggacaactcatccccagtttcgggagc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 472 tgtgatttgaatgtgaaatgatgcacagatgttggacaactcatccccagtttcgggagc 413
Query: 241 agctcggggcatagtatctgtaccatccggttagaaacttccattcaaagaagtttgcat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 agctcggggcatagtatctgtaccatccggttagaaacttccattcaaagaagtttgcat 353
Query: 301 catggtgtgaccaggttgtttcaaaggtggagaacttttaagactgtggccttgctagca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 catggtgtgaccaggttgtttcaaaggtggagaacttttaagactgtggccttgctagca 293
Query: 361 ggaaagggttgctgggggtgggcctggaaggtgatatctgccttagttccagctaagcac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 ggaaagggttgctgggggtgggcctggaaggtgatatctgccttagttccagctaagcac 233
Query: 421 tctggtttctggctctacaagatgtgaacaagtgtcttagtcagggtttctattcctaca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 232 tctggtttctggctctacaagatgtgaacaagtgtcttagtcagggtttctattcctaca 173
Query: 481 caagacattatgatcaagaagcacgttgggggtggg 516
||||||||||||||||||||||||||||||||||||
Sbjct: 172 caagacattatgatcaagaagcacgttgggggtggg 137
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 517
Length of database: 917
Length adjustment: 10
Effective length of query: 507
Effective length of database: 907
Effective search space: 459849
Effective search space used: 459849
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
